DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d2 and cyp-13A5

DIOPT Version :9

Sequence 1:NP_001284806.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_496112.1 Gene:cyp-13A5 / 188356 WormBaseID:WBGene00011672 Length:520 Species:Caenorhabditis elegans


Alignment Length:552 Identity:144/552 - (26%)
Similarity:244/552 - (44%) Gaps:99/552 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLVAFATLL--------LWDFLWRRRGNGILPGPRPLPFLGNLLMYRGLDPEQIMDFVKKNQRKY 65
            :|:|.|:.:        :|.| |.|:|   :.|||..||.|.:..::..:...::. :.:..::|
 Worm     5 ILIAGASFIGLLTYYIWIWSF-WIRKG---VKGPRGFPFFGVIHEFQDYENPGLLK-LGEWTKEY 64

  Fly    66 GRLYRVWILHQLAVFSTDPRDIEFVLSSQQHITKNNLY-KLLNCWLGD-------GLLMSTGRKW 122
            |.:|.:....:..:..::|..:..|...|    .:|.| :..|...||       .|:.:.|.:|
 Worm    65 GPIYGITEGVEKTLIVSNPEFVHEVFVKQ----FDNFYGRKTNPIQGDPNKNKRAHLVSAQGHRW 125

  Fly   123 HGRRKIITPTFHFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICLTALDIIAETAMG- 186
            ...|.:.:|||..|.|.:.:...::....::..|...:.....:::........||||...||| 
 Worm   126 KRLRTLSSPTFSNKNLRKIMSTVEETVVELMRHLDDASAKGKAVDLLDYYQEFTLDIIGRIAMGQ 190

  Fly   187 TKINAQKNPNLPYVQA-----------VNDVTNILIKRFIHAWQRVDWIFRLTQPTEAKRQDKAI 240
            |:....:||.||.|:.           |:.:..|....|...:.|    |...||        |.
 Worm   191 TESLMFRNPMLPKVKGIFKDGRKLPFLVSGIFPIAGTMFREFFMR----FPSIQP--------AF 243

  Fly   241 KVMHDFTENIIRERRETLVNNSK---ETTPE------------------EEVNFLG-QKRRMALL 283
            .:| ...|..:.:|.|....:.|   |.:.|                  ||.:.|| .|..:|.:
 Worm   244 DIM-STVEKALNKRLEQRAADEKAGIEPSGEPQDFIDLFLDARANVDFFEEESALGFAKTEIAKV 307

  Fly   284 DVLLQSTIDGAPLSDEDIREEVDTFMFEGHDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGED 348
            |  .|.|.|       :|..::..|:..|:|||..::|:..|.::||||:|::||:|:      |
 Worm   308 D--KQLTFD-------EIIGQLFVFLLAGYDTTALSLSYSSYLLARHPEIQKKLQEEV------D 357

  Fly   349 RKSP---VTLRDLGELKFMENVIKESLRLHPPVPMI-GRWFAEDVEIRGKHIPAGTNFTMGIFVL 409
            |:.|   ||...:.:||:||.|:||:||::|...:: .|...::..:.|..|..|||..:..:.|
 Worm   358 RECPNPEVTFDQISKLKYMECVVKEALRMYPLASIVHNRKCMKETNVLGVQIEKGTNVQVDTWTL 422

  Fly   410 LRDPEYF-ESPDEFRPERFDADVPQIHPYA---YIPFSAGPRNCIGQKFAMLEMKSTVSKLLRH- 469
            ..||:.: |..:||||||:::.....  ||   |:||..|||.|||.:.||:|.|..::.:|:. 
 Worm   423 HYDPKVWGEDANEFRPERWESGDELF--YAKGGYLPFGMGPRICIGMRLAMMEKKMLLTHILKKY 485

  Fly   470 -FELLPLGPEPRHSMNIVLRSANGVHLGLKPR 500
             ||.......|...:.....:...|.|.|.||
 Worm   486 TFETSTQTEIPLKLVGSATTAPRSVMLKLTPR 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_001284806.1 p450 32..495 CDD:278495 132/514 (26%)
cyp-13A5NP_496112.1 p450 33..514 CDD:278495 133/515 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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