DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d2 and cyp-13A12

DIOPT Version :9

Sequence 1:NP_001284806.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_499705.1 Gene:cyp-13A12 / 184473 WormBaseID:WBGene00008810 Length:518 Species:Caenorhabditis elegans


Alignment Length:553 Identity:152/553 - (27%)
Similarity:243/553 - (43%) Gaps:99/553 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLGVVGVLLLVAFATLLLWDF-LWRRRGNGILPGPRPLPFLGNLL-MYRGLDPEQIMDFVKKNQR 63
            :..::|||      :..||.: .|:|||   :.||...|.||:.| |....:|..:.  :|:..:
 Worm     9 LTSIIGVL------SFYLWTWSYWKRRG---IAGPSGYPILGSALEMLSSENPPYLQ--LKEWTK 62

  Fly    64 KYGRLYRVWILHQLAVFSTDPRDIEFVLSSQQHITKNNLY-KLLNCWLGD-------GLLMSTGR 120
            :||::|.:.......:..:||..::.|...|.    :|.: :.||...||       .|..|.|.
 Worm    63 QYGKVYGITEGLSRTLVISDPDLVQEVFVKQY----DNFFGRKLNPIQGDPNKDKRVNLFSSQGH 123

  Fly   121 KWHGRRKIITPTFHFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICLTALDIIAETAM 185
            :|...|.|.:|||....|.:.....::.:..::..::...||..||::........||:|...||
 Worm   124 RWKRLRTISSPTFSNNSLRKLKTTVEECAVELLRHIEQHTDGGQPIDLLDFYQEFTLDVIGRIAM 188

  Fly   186 G-TKINAQKNPNLPYVQAV--NDVTNILIKRFIHAWQRVDWIFRLTQ---PTEAKRQDKAIKVMH 244
            | |.....|||.||||:||  .....:.:...:..|  :..|.|:..   |...|  :.|:.|:.
 Worm   189 GQTDSQMFKNPLLPYVRAVFGEPRKGLFLSGSLAPW--IGPILRMVMFSLPNIVK--NPAVHVIR 249

  Fly   245 DFTENIIRERRETLVNNSKE-TTPEEEVNFLGQKRRMALLDVLLQSTIDGAPLSD---------- 298
             .|.|.:.:|.:..:.:.|. ..|.|..:|         :|:.|.:..|...|.:          
 Worm   250 -HTSNAVEQRVKLRMADEKAGIDPGEPQDF---------IDLFLDAKSDDVELENNEDFTKAGVK 304

  Fly   299 -------EDIREEVDTFMFEGHDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGEDRK---SPV 353
                   |:|..:...|:..|.|||..::|:..:.::.||:||::||:||      ||:   ..|
 Worm   305 VTRQLTTEEIVGQCFVFLIAGFDTTALSLSYSSFLLATHPKVQKKLQEEI------DRECADPEV 363

  Fly   354 TLRDLGELKFMENVIKESLRLHPPVPMIG-----RWFAEDVEIRGKHIPAGTNFTMGIFVLLRDP 413
            |...|.:||:||.||||:||::|    :|     |......:|....|..|||.....:.|..|.
 Worm   364 TFDQLSKLKYMECVIKETLRMYP----LGALANSRCCMRATKIGNYEIDEGTNILCDTWTLHSDK 424

  Fly   414 EYF-ESPDEFRPERFDADVPQIHPY---AYIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHFELLP 474
            ..: |..:||:|||:::.  ..|.|   .||||..|||.|||.:.|.:|.|..:|.:||.:.|  
 Worm   425 SIWGEDAEEFKPERWESG--DEHFYQKGGYIPFGLGPRQCIGMRLAYMEEKLLLSHILRKYTL-- 485

  Fly   475 LGPEPRHSMNIVLR-------SANGVHLGLKPR 500
               |..:...|.|:       ....|.|.|.||
 Worm   486 ---EVCNKTQIPLKLIGSRTTQPESVWLNLTPR 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_001284806.1 p450 32..495 CDD:278495 139/514 (27%)
cyp-13A12NP_499705.1 p450 33..507 CDD:278495 138/510 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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