DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d2 and cyp-25A1

DIOPT Version :9

Sequence 1:NP_001284806.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_497775.3 Gene:cyp-25A1 / 183247 WormBaseID:WBGene00007963 Length:502 Species:Caenorhabditis elegans


Alignment Length:533 Identity:142/533 - (26%)
Similarity:250/533 - (46%) Gaps:81/533 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLVAFATLLLWDFLWRR-----RGNGILPGPRPLPFLGNLLMYRGLDPEQIMDFVKKNQ------ 62
            |:::..|..::..|.||     |....|.||.|..|||||  .:..:.::.:.:...|:      
 Worm     9 LVISIFTFFIYIILARRERFKLREKIGLSGPEPHWFLGNL--KQTAERKEKLGYDDANRWFNELH 71

  Fly    63 RKYGRLYRVWILHQLAVFSTDPRDIEFV----LSSQQHITKNNLYKLLNCWLGDGLLMSTGRKWH 123
            .:||..:.::...|:.:..::.:||:.|    .|:....:..::|: .|......|:.|....|.
 Worm    72 EQYGETFGIYYGSQMNIVISNEKDIKEVFIKNFSNFSDRSVPSIYE-ANQLTASLLMNSYSSGWK 135

  Fly   124 GRRKIITPTFHFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICLTALDIIAETAMGTK 188
            ..|..|.|.|....::...|..:.:..:.::.|:.:|......:|:.......||:|.:.|....
 Worm   136 HTRSAIAPIFSTGKMKAMQETINSKVDLFLDILREKASSGQKWDIYDDFQGLTLDVIGKCAFAID 200

  Fly   189 INAQKNPN-LPYVQAVNDVTNILIK--RFIHA----------WQRVDWIFRLTQPTEAKRQDKAI 240
            .|.|::.| :.||.|...::||.|:  :.|.|          |:.   :::.|...:|:     |
 Worm   201 SNCQRDRNDVFYVNAKKYISNIDIRHSKIIAASVLLPELSTFWKA---LYKYTPLADAE-----I 257

  Fly   241 KVMHDFTENIIRERRETLVNNSKETTPEEEVNFLGQKRRMALLDVLLQSTID-GAPLSDEDIREE 304
            .::...: |:...||....::|.:                 ||.:||....| ..|::.:::.|.
 Worm   258 PLVEGLS-NVYERRRGGEGSDSVD-----------------LLKLLLNREDDKSKPMTKQEVIEN 304

  Fly   305 VDTFMFEGHDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRDLGELKFMENVIK 369
            ...|:..|::||::|:::|.|.:|::|.|||:|.:||.:.   .....:|...:..:|:::.|.|
 Worm   305 CFAFLLAGYETTSTAMTYCSYLLSKYPNVQQKLYEEIMEA---KENGGLTYDSIHNMKYLDCVYK 366

  Fly   370 ESLRLHPPV-PMIGRWFAEDVEIRGKHIPAGTNFTMGIFVLL-----RDPEYFESPDEFRPERFD 428
            |:||.:||| ..|.|...||:.|||:..|.|     .|.|.|     |:||.::||:||.||||:
 Worm   367 ETLRFYPPVIHFIRRLCREDITIRGQFYPKG-----AIVVCLPHTVHRNPENWDSPEEFHPERFE 426

  Fly   429 ADVPQIHPYAYIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHFEL------LPLGPEPRHSMNIVL 487
            ....:.....:|||..|||.|:|.:||.:|.|:|:.|||..|||      ..|.|:   ...:::
 Worm   427 NWEEKSSSLKWIPFGVGPRYCVGMRFAEMEFKTTIVKLLDTFELKQFEGEADLIPD---CNGVIM 488

  Fly   488 RSANGVHLGLKPR 500
            |..:.|.|.||||
 Worm   489 RPNDPVRLHLKPR 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_001284806.1 p450 32..495 CDD:278495 130/498 (26%)
cyp-25A1NP_497775.3 p450 37..496 CDD:278495 130/498 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.