DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d2 and cyp-29A2

DIOPT Version :9

Sequence 1:NP_001284806.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_505847.1 Gene:cyp-29A2 / 179550 WormBaseID:WBGene00011830 Length:503 Species:Caenorhabditis elegans


Alignment Length:508 Identity:182/508 - (35%)
Similarity:285/508 - (56%) Gaps:30/508 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VGVLLLVAF-----ATLLLWDFLWRRRGNGILPGPRPLPFLGNLLMYRGLDPEQIMD-FVK--KN 61
            :.:.:::|:     .|||.:...|:....  ||||...|..|||....|...|.:.. |:.  ..
 Worm     7 ISIAIILAYLATWIPTLLKYKRHWQYGSK--LPGPPAHPIFGNLGPIVGKKTEDLPSVFINWAAE 69

  Fly    62 QRKYGR-LYRVWILHQLAVFSTDPRDIEFVLSSQQHITKNNLYKLLNCWLGDGLLM-STGRKWHG 124
            ||..|. :.||.||.::..:..:.:....::.|.....|.:.|:..:.|||.|||: ..|.:|..
 Worm    70 QRDQGHSVMRVMILGKVYAWPLNGKAAAAIIDSTTETNKGDDYRFFDPWLGGGLLLEGYGERWKS 134

  Fly   125 RRKIITPTFHFKILEQFVEIFDQQSAVMVEQLQS-RADGMTPINIFPVICLTALDIIAETAMGTK 188
            .||::||.|||..|..:.|:|:.:|.::::.|.. .|.|.| ::|||.:...|||||:|||||.|
 Worm   135 HRKMLTPAFHFAKLGGYFEVFNNESKILIDLLSDFSASGET-VDIFPYVKRCALDIISETAMGIK 198

  Fly   189 INAQKNPNLPYVQAVNDVTNILIKRFIHAWQRVDWIFRLTQPTEAKRQ-DKAIKVMHDFTENIIR 252
            |:||.|.:..|||||.....|.:....:...:..:||   ..|..|.| |..:..:...||.:|:
 Worm   199 IDAQINHDHKYVQAVEGYNKIGVLVSFNPHLKNQFIF---WATGYKAQYDDYLSTLKSMTEKVIK 260

  Fly   253 ERRETLVNNSKETTPEEEVNFLGQKRRMALLDVLLQSTIDGAPLSDEDIREEVDTFMFEGHDTTT 317
            |||  ..::|.|.  |:|.:    ||.|..||::| |..:...|:.||||:|||||||.||||||
 Worm   261 ERR--AAHDSGEV--EKETS----KRMMNFLDLML-SMEESNQLTSEDIRQEVDTFMFAGHDTTT 316

  Fly   318 SAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRDLGELKFMENVIKESLRLHPPVPMIG 382
            |:.|:..:.::.:|.||:::.:|:.:|.|:|..:.:||.::..|.:::.|:|||.|:..|||.:.
 Worm   317 SSTSWACWNLAHNPNVQEKVYKEMIEVFGDDPNTDITLENVNNLNYLDIVLKESKRIIAPVPALQ 381

  Fly   383 RWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYFESPDEFRPERFDAD-VPQIHPYAYIPFSAGP 446
            |....|:||.|..:|||.|.|:...||..:...|::|.||.|:||..| |.:.|||.::||.|||
 Worm   382 RKLTNDLEIDGYIVPAGGNVTISPMVLHSNHHVFKNPTEFNPDRFLPDEVSKRHPYDFMPFLAGP 446

  Fly   447 RNCIGQKFAMLEMKSTVSKLLRHFELLPL--GPEPRHSMNIVLRSANGVHLGL 497
            |||||||||.|..|..:|.::|:|::.|.  ..:.:..:.:|.:.:||:.:.|
 Worm   447 RNCIGQKFAQLNEKVMISHIVRNFKIEPTLKYNDTKPCLEVVTKPSNGIPVRL 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_001284806.1 p450 32..495 CDD:278495 175/472 (37%)
cyp-29A2NP_505847.1 p450 37..495 CDD:278495 174/470 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28797
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 1 1.100 - - LDO PTHR24291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.820

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