DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d2 and cyp-13A10

DIOPT Version :9

Sequence 1:NP_001284806.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_496085.3 Gene:cyp-13A10 / 174522 WormBaseID:WBGene00014254 Length:519 Species:Caenorhabditis elegans


Alignment Length:539 Identity:135/539 - (25%)
Similarity:228/539 - (42%) Gaps:78/539 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLVAFATLLLWDF-LWRRRGNGILPGPRPLPFLGNLLMYRGLDPE-----QIMDFVKKNQRKYGR 67
            |.:.|.:..||.: .|||||   :|||...|.:|:  ..:.|..|     ||.|:.|.....|| 
 Worm    11 LFIGFISYYLWIWTYWRRRG---IPGPLGYPLVGS--FPKTLKSEYPQYLQIRDWTKLYGPIYG- 69

  Fly    68 LYRVWILHQLAVFSTDPRDIEFV--LSSQQHITKNNLY-KLLNCWLGD-------GLLMSTGRKW 122
             |....:..|.|     .||:.|  :..:|:   :|.| :.||...||       .|..:.|.:|
 Worm    70 -YTEGTIKTLIV-----SDIDIVRQIFVEQY---DNFYGRKLNPIQGDPEKDERTNLFSAQGFRW 125

  Fly   123 HGRRKIITPTFHFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICLTALDIIAETAMG- 186
            ...|.|.:|||....|.:.....:..:..::..::.:......|::........:|.|...||| 
 Worm   126 KRLRAISSPTFSNNSLRKINVTVEDSAMELLRHIEEQTSEGQQIDMLQFYQEFTMDTIGRIAMGQ 190

  Fly   187 TKINAQKNPNLPYVQAV---NDVTNILIKRFIHAWQRVDWIFRLTQPTEAKRQDKAIKVMHDFTE 248
            |.....|||.|.:|:|:   |.....||........:|...|.|..|...     |...:|    
 Worm   191 TDSQMFKNPLLKFVRAIFGDNRKHIPLIGGVFPTLAQVFRFFMLKFPLLG-----AANFIH---- 246

  Fly   249 NIIRERRETLVNNSKETTPEEEVNFLGQKRRMALLDVLLQSTID-------------------GA 294
              :.:...|.|.|..:....:..|.:........:|:.|::..|                   ..
 Worm   247 --VNKTVVTAVQNRIDQRENDRKNGIEIGEPQDFIDLFLEARADDVEHFQENNGDFSKTSSYGNR 309

  Fly   295 PLSDEDIREEVDTFMFEGHDTTTSAISFCLYEISRHPEVQQRLQQEI-RDVLGEDRKSPVTLRDL 358
            .|:.::|..:...|:..|.|||..::|:..:.::.|||||::||:|| |:.:    :..::...|
 Worm   310 QLTTQEIVGQCLVFLIAGFDTTALSLSYTTFLLATHPEVQKKLQEEIERECI----EPSISFDHL 370

  Fly   359 GELKFMENVIKESLRLHPPVPMI-GRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYF-ESPDE 421
            .:||:|:.:|||:|||:|...|. .|......::....:..||...:..:.|..|.:.: :...|
 Worm   371 SKLKYMDCIIKETLRLYPLGTMANSRRCMRATKLGNVEVEVGTMVQVDTWSLHTDTKIWGDDAKE 435

  Fly   422 FRPERF-DADVPQI-HPYAYIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHFELLPLGPEPRHSMN 484
            |:|||: |.:..|: ....||.|..|||.|:|.:.|.:|.|..::.:||.: ...:|.:....:.
 Worm   436 FKPERWLDPNCDQVFQKGGYISFGLGPRQCVGMRLAYMEEKMLLAHILRKY-TFEVGTKTEIPLK 499

  Fly   485 IVLRSA---NGVHLGLKPR 500
            :|.|:.   ..|.:.||.|
 Worm   500 LVGRATTQPETVWMHLKQR 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_001284806.1 p450 32..495 CDD:278495 123/508 (24%)
cyp-13A10NP_496085.3 p450 32..500 CDD:278495 120/495 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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