DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d2 and Cyp46a1

DIOPT Version :9

Sequence 1:NP_001284806.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_034140.1 Gene:Cyp46a1 / 13116 MGIID:1341877 Length:500 Species:Mus musculus


Alignment Length:528 Identity:156/528 - (29%)
Similarity:256/528 - (48%) Gaps:76/528 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VVGVLLLVAFATLLLWDFLWRRRGN-GILPG-PRPLPFLGNLLMYRGLD-------PEQIMDFVK 59
            ::|..:|:||.  |...|:.|.|.. ..:|| |||...||:|..:...|       .:..:|:.|
Mouse     7 LLGSAVLLAFG--LCCTFVHRARSRYEHIPGPPRPSFLLGHLPYFWKKDEDCGRVLQDVFLDWAK 69

  Fly    60 KNQRKYGRLYRVWILHQLAVFSTDPRDIEFVLSSQQHITKNNLYKLLNCWLGDGL----LMST-- 118
                |||.:.||.:.::.:|..|.|..::..|.|.::...:.:|:.|....|:.|    |:|.  
Mouse    70 ----KYGPVVRVNVFYKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVSECD 130

  Fly   119 -GRKWHGRRKIITPTFHFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICLTALDIIAE 182
             || |:.:||::...|....|...:|.|::::..:||.|:::|||.||:::..::....:||:|:
Mouse   131 YGR-WYKQRKVMDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTCATIDILAK 194

  Fly   183 TAMGTK----INAQKNPNLPYVQAVNDV-------TNILIKRFIHAWQRVDWIFRLTQPTEAKRQ 236
            .|.|.:    :.|||    |..|||..:       .|.|.|            |...:..:.:..
Mouse   195 AAFGMETSMLLGAQK----PLSQAVKVMLEGISASRNTLAK------------FMPGKRKQLREI 243

  Fly   237 DKAIKVMHDFTENIIRERRETLVNNSKETTPEEEVNFLGQKRRMALLDVLLQ--STIDGAPLSDE 299
            .::|:::....::.::.|||.|...  |..|               .|:|.|  ...:||. .||
Mouse   244 RESIRLLRQVGKDWVQRRREALKRG--EDMP---------------ADILTQILKAEEGAQ-DDE 290

  Fly   300 DIREEVDTFMFEGHDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRDLGELKFM 364
            .:.:...||...||:|:.:.::|.:.|:||.||:..|||.|:.:|:|..|.  :...|||.|:::
Mouse   291 VLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVVGSKRH--LDYEDLGRLQYL 353

  Fly   365 ENVIKESLRLHPPVPMIGRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYFESPDEFRPERFDA 429
            ..|:||||||:||.....|...|:..|.|..:|..|......:|:.|...|||.|..|.|:||..
Mouse   354 SQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGP 418

  Fly   430 DVPQIHPYAYIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHFELLPLGPEPRHSM--NIVLRSANG 492
            ..|:.. :.|.|||.|.|:||||:||.:|:|..::|||:..| ..|.|..|..:  ...|:..:.
Mouse   419 GAPKPR-FTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRIE-FRLVPGQRFGLQEQATLKPLDP 481

  Fly   493 VHLGLKPR 500
            |...|:||
Mouse   482 VLCTLRPR 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_001284806.1 p450 32..495 CDD:278495 145/492 (29%)
Cyp46a1NP_034140.1 p450 34..466 CDD:278495 142/474 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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