DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d2 and Cyp46a1

DIOPT Version :10

Sequence 1:NP_525043.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_034140.1 Gene:Cyp46a1 / 13116 MGIID:1341877 Length:500 Species:Mus musculus


Alignment Length:528 Identity:156/528 - (29%)
Similarity:256/528 - (48%) Gaps:76/528 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VVGVLLLVAFATLLLWDFLWRRRGN-GILPG-PRPLPFLGNLLMYRGLD-------PEQIMDFVK 59
            ::|..:|:||.  |...|:.|.|.. ..:|| |||...||:|..:...|       .:..:|:.|
Mouse     7 LLGSAVLLAFG--LCCTFVHRARSRYEHIPGPPRPSFLLGHLPYFWKKDEDCGRVLQDVFLDWAK 69

  Fly    60 KNQRKYGRLYRVWILHQLAVFSTDPRDIEFVLSSQQHITKNNLYKLLNCWLGDGL----LMST-- 118
                |||.:.||.:.::.:|..|.|..::..|.|.::...:.:|:.|....|:.|    |:|.  
Mouse    70 ----KYGPVVRVNVFYKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVSECD 130

  Fly   119 -GRKWHGRRKIITPTFHFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICLTALDIIAE 182
             || |:.:||::...|....|...:|.|::::..:||.|:::|||.||:::..::....:||:|:
Mouse   131 YGR-WYKQRKVMDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTCATIDILAK 194

  Fly   183 TAMGTK----INAQKNPNLPYVQAVNDV-------TNILIKRFIHAWQRVDWIFRLTQPTEAKRQ 236
            .|.|.:    :.|||    |..|||..:       .|.|.|            |...:..:.:..
Mouse   195 AAFGMETSMLLGAQK----PLSQAVKVMLEGISASRNTLAK------------FMPGKRKQLREI 243

  Fly   237 DKAIKVMHDFTENIIRERRETLVNNSKETTPEEEVNFLGQKRRMALLDVLLQ--STIDGAPLSDE 299
            .::|:::....::.::.|||.|...  |..|               .|:|.|  ...:||. .||
Mouse   244 RESIRLLRQVGKDWVQRRREALKRG--EDMP---------------ADILTQILKAEEGAQ-DDE 290

  Fly   300 DIREEVDTFMFEGHDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRDLGELKFM 364
            .:.:...||...||:|:.:.::|.:.|:||.||:..|||.|:.:|:|..|.  :...|||.|:::
Mouse   291 VLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVVGSKRH--LDYEDLGRLQYL 353

  Fly   365 ENVIKESLRLHPPVPMIGRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYFESPDEFRPERFDA 429
            ..|:||||||:||.....|...|:..|.|..:|..|......:|:.|...|||.|..|.|:||..
Mouse   354 SQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGP 418

  Fly   430 DVPQIHPYAYIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHFELLPLGPEPRHSM--NIVLRSANG 492
            ..|:.. :.|.|||.|.|:||||:||.:|:|..::|||:..| ..|.|..|..:  ...|:..:.
Mouse   419 GAPKPR-FTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRIE-FRLVPGQRFGLQEQATLKPLDP 481

  Fly   493 VHLGLKPR 500
            |...|:||
Mouse   482 VLCTLRPR 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_525043.1 CYP4 66..495 CDD:410721 132/450 (29%)
Cyp46a1NP_034140.1 CYP46A1-like 61..484 CDD:410706 136/465 (29%)

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