DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d2 and Cyp3a13

DIOPT Version :9

Sequence 1:NP_001284806.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_031845.1 Gene:Cyp3a13 / 13113 MGIID:88610 Length:503 Species:Mus musculus


Alignment Length:491 Identity:150/491 - (30%)
Similarity:255/491 - (51%) Gaps:61/491 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLVAFATLLLWDFLWRRRGNGI-----LPGPRPLPFLGNLLMYRGLDPEQIMDFVKKNQRKYGRL 68
            :|:|.:.:||  :|:....:||     :|||:||||||.:|.|:    :...:...:..:|||::
Mouse    13 MLLATSLVLL--YLYGTHSHGIFKKLGIPGPKPLPFLGTILAYQ----KGFWECDIQCHKKYGKM 71

  Fly    69 YRVWILHQLAVFSTDPRDIEFVLSSQQHITKNN---------LYKLLNCWLGDGLLMSTGRKWHG 124
            :.::...|..:..|||..|:.||..:.:.|..|         |.|.::        :|...:|..
Mouse    72 WGLYDGRQPVLAITDPDIIKTVLVKECYSTFTNRRRFGPVGILKKAIS--------ISENEEWKR 128

  Fly   125 RRKIITPTFHFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICLTALDIIAETAMGTKI 189
            .|.:::|||....|::...|.:|.:.|:|..::.......|.::..:....::|:|..|:.|..|
Mouse   129 IRALLSPTFTSGRLKEMFPIINQFTDVLVRNMRQGLGEGKPTSMKDIFGAYSMDVITATSFGVNI 193

  Fly   190 NAQKNPNLPYVQAVNDVTNILIKRFIHAWQRVDWIFRLTQPTEAKR-----QDKAIKVMHDFTEN 249
            ::..||..|:|:.:..:....|  |...:..|.....||...:|..     :|    |:..||  
Mouse   194 DSLNNPQDPFVEKIKKLLKFDI--FDPLFLSVTLFPFLTPVFDALNVSLFPRD----VISFFT-- 250

  Fly   250 IIRERRETLVNNSKETTPEEEVNFLGQKRRMALLDVLLQS----TIDG-APLSDEDIREEVDTFM 309
                   |.|...||...:|:     :|:|:..|.:::.|    |.:. ..|||.:|..:...|:
Mouse   251 -------TSVERMKENRMKEK-----EKQRVDFLQLMINSQNYKTKESHKALSDVEIVAQSVIFI 303

  Fly   310 FEGHDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRDLGELKFMENVIKESLRL 374
            |.|::||:||:||.||.::.||:||::||.||...|  ..|:|.|...|.::::::.|:.|:|||
Mouse   304 FAGYETTSSALSFALYLLAIHPDVQKKLQDEIDAAL--PNKAPATYDTLLQMEYLDMVVNETLRL 366

  Fly   375 HPPVPMIGRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYFESPDEFRPERFD-ADVPQIHPYA 438
            :|....:.|....||||.|..||.||...:..|.|.:||:|:..|:|||||||. .:...|:||.
Mouse   367 YPIAGRLERVCKTDVEINGLFIPKGTVVMIPTFALHKDPKYWPEPEEFRPERFSKKNQDSINPYM 431

  Fly   439 YIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHFELLP 474
            |:||.:|||||||.:||::.||..:.::|::|.:.|
Mouse   432 YLPFGSGPRNCIGMRFALINMKVALVRVLQNFTVQP 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_001284806.1 p450 32..495 CDD:278495 143/463 (31%)
Cyp3a13NP_031845.1 p450 39..491 CDD:365848 143/463 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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