DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d2 and LOC103692784

DIOPT Version :9

Sequence 1:NP_001284806.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_038935978.1 Gene:LOC103692784 / 103692784 RGDID:9252969 Length:337 Species:Rattus norvegicus


Alignment Length:337 Identity:128/337 - (37%)
Similarity:193/337 - (57%) Gaps:10/337 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 IFPVICLTALDIIAETAMGTKINAQKNPNLPYVQAVNDVTNILIKRFIHAWQRVDWIFRLTQPTE 232
            :|..|.|..||.:.:...|...|.|::|: .|:.|:.:::::.|||....:..:|:::..|  .:
  Rat     1 MFENISLMTLDSLQKCLFGFDSNCQESPS-EYISAILELSSLTIKRSYQLFLYLDFLYYRT--AD 62

  Fly   233 AKRQDKAIKVMHDFTENIIRERRETLVNNSKETTPEEEVNFLGQKRRMALLDVLLQSTID-GAPL 296
            .:|..||..::|.||:.:|||||..|.:...:...|.:..  .:.:.:..:||||.:..: |..|
  Rat    63 GRRFRKACDLVHSFTDAVIRERRRLLSSQGVDEFLESKTK--SKSKTLDFIDVLLLAKDEHGKEL 125

  Fly   297 SDEDIREEVDTFMF--EGHDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRDLG 359
            ||||||.|.|||||  |.||||.|.:|:.||.::||||.|:...||:.::|.:.....:...||.
  Rat   126 SDEDIRAEADTFMFGDESHDTTASTLSWILYNLARHPEYQESCLQEVWELLRDREPEEIEWDDLA 190

  Fly   360 ELKFMENVIKESLRLHPPVPMIGRWFAEDVEI-RGKHIPAGTNFTMGIFVLLRDPEYFESPDEFR 423
            :|.|:...||||||||||...:.|...:|:.: .|:.||.|....:.||.:..:|..:..|:.:.
  Rat   191 QLPFLTMCIKESLRLHPPAVDLLRRCTQDIVLPDGRVIPKGNICVISIFGIHHNPSVWPDPEVYD 255

  Fly   424 PERFDADVPQIH-PYAYIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHFELLPLGPEPRHSMNIVL 487
            |.|||.:..|.. |.::|||||||||||||.|||.|||..|:..|..|.|||...|||....|:|
  Rat   256 PFRFDPESRQKRSPLSFIPFSAGPRNCIGQTFAMNEMKVAVALTLLRFRLLPDDKEPRRKPEIIL 320

  Fly   488 RSANGVHLGLKP 499
            |:..|:.|.::|
  Rat   321 RAEGGLRLLVEP 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_001284806.1 p450 32..495 CDD:278495 126/331 (38%)
LOC103692784XP_038935978.1 cytochrome_P450 <1..328 CDD:425388 126/331 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.