DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d2 and Cyp4v3

DIOPT Version :10

Sequence 1:NP_525043.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_598730.1 Gene:Cyp4v3 / 102294 MGIID:2142763 Length:525 Species:Mus musculus


Alignment Length:523 Identity:204/523 - (39%)
Similarity:307/523 - (58%) Gaps:48/523 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LGVVGVLLLVA-FATLLLWDFLWRRRGNGILPG-PRPLPFLGNLLMYRGLDPEQIMDFVKKNQR- 63
            :.:.|..:|:: |..|:.:...|::..:  :|. .|..|.:|:.|..:..:.|.....:...:. 
Mouse    22 VSLAGATILISIFPMLVSYARKWQQMRS--IPSVARAYPLVGHALYMKPNNAEFFQQLIYYTEEF 84

  Fly    64 KYGRLYRVWI--LHQLAVFSTDPRDIEFVLSSQQHITKNNLYKLLNCWLGDGLLMSTGRKWHGRR 126
            ::..:.::||  :..:|::..:  ::|.:|:|.:.|.|:.|||.|..|||.|||.|||.||..||
Mouse    85 RHLPIIKLWIGPVPLVALYKAE--NVEVILTSSKQIDKSFLYKFLQPWLGLGLLTSTGSKWRTRR 147

  Fly   127 KIITPTFHFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICLTALDIIAETAMGTKINA 191
            |::||||||.|||.|:::.::|:.::|.:|:...: ....|.|..|.|.|||||.|||||..|.|
Mouse   148 KMLTPTFHFTILENFLDVMNEQANILVNKLEKHVN-QEAFNCFFYITLCALDIICETAMGKNIGA 211

  Fly   192 QKNPNLPYVQAVNDVTNILIKRFIHAWQRVD-W--IFRLTQPTEAKRQDKAIKVMHDFTENIIRE 253
            |.|.:..||:.|..:::::.:|....|...| |  :|:     |.:...:.:|.:|.||.|:|.|
Mouse   212 QSNNDSEYVRTVYRMSDMIYRRMKMPWLWFDLWYLVFK-----EGRDHKRGLKCLHTFTNNVIAE 271

  Fly   254 RRETLVNNSKETTPEEEVNFLG------QKRRMALLDVLLQST-IDGAPLSDEDIREEVDTFMFE 311
            |       .||...||:....|      :.:|.|.||:||..| .:|..||.|||||||||||||
Mouse   272 R-------VKERKAEEDWTGAGRGPIPSKNKRKAFLDLLLSVTDEEGNRLSQEDIREEVDTFMFE 329

  Fly   312 GHDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRDLGELKFMENVIKESLRLHP 376
            |||||.:||::.||.:..:||||:::.||:.:|.|...: ||||.||.:||:::.||||:||:.|
Mouse   330 GHDTTAAAINWSLYLLGTNPEVQRKVDQELDEVFGRSHR-PVTLEDLKKLKYLDCVIKETLRVFP 393

  Fly   377 PVPMIGRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYFESPDEFRPERFDADVPQ-IHPYAYI 440
            .||:..|..:||.|:.|..:..||...:..:.|.|||.||..|:|||||||..:..| .|||||:
Mouse   394 SVPLFARSLSEDCEVGGYKVTKGTEAIIIPYALHRDPRYFPDPEEFRPERFFPENSQGRHPYAYV 458

  Fly   441 PFSAGPRNCIGQKFAMLEMKSTVSKLLRHF--------ELLPLGPEPRHSMNIVLRSANGVHLGL 497
            |||||||||||||||::|.|:.::.:||.|        |.|.|..:      ::||..||:.:.|
Mouse   459 PFSAGPRNCIGQKFAVMEEKTILACILRQFWVESNQKREELGLAGD------LILRPNNGIWIKL 517

  Fly   498 KPR 500
            |.|
Mouse   518 KRR 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_525043.1 CYP4 66..495 CDD:410721 190/449 (42%)
Cyp4v3NP_598730.1 CYP4V 76..515 CDD:410773 190/460 (41%)

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