DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d2 and Cyp4v3

DIOPT Version :9

Sequence 1:NP_001284806.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_598730.1 Gene:Cyp4v3 / 102294 MGIID:2142763 Length:525 Species:Mus musculus


Alignment Length:523 Identity:204/523 - (39%)
Similarity:307/523 - (58%) Gaps:48/523 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LGVVGVLLLVA-FATLLLWDFLWRRRGNGILPG-PRPLPFLGNLLMYRGLDPEQIMDFVKKNQR- 63
            :.:.|..:|:: |..|:.:...|::..:  :|. .|..|.:|:.|..:..:.|.....:...:. 
Mouse    22 VSLAGATILISIFPMLVSYARKWQQMRS--IPSVARAYPLVGHALYMKPNNAEFFQQLIYYTEEF 84

  Fly    64 KYGRLYRVWI--LHQLAVFSTDPRDIEFVLSSQQHITKNNLYKLLNCWLGDGLLMSTGRKWHGRR 126
            ::..:.::||  :..:|::..:  ::|.:|:|.:.|.|:.|||.|..|||.|||.|||.||..||
Mouse    85 RHLPIIKLWIGPVPLVALYKAE--NVEVILTSSKQIDKSFLYKFLQPWLGLGLLTSTGSKWRTRR 147

  Fly   127 KIITPTFHFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICLTALDIIAETAMGTKINA 191
            |::||||||.|||.|:::.::|:.::|.:|:...: ....|.|..|.|.|||||.|||||..|.|
Mouse   148 KMLTPTFHFTILENFLDVMNEQANILVNKLEKHVN-QEAFNCFFYITLCALDIICETAMGKNIGA 211

  Fly   192 QKNPNLPYVQAVNDVTNILIKRFIHAWQRVD-W--IFRLTQPTEAKRQDKAIKVMHDFTENIIRE 253
            |.|.:..||:.|..:::::.:|....|...| |  :|:     |.:...:.:|.:|.||.|:|.|
Mouse   212 QSNNDSEYVRTVYRMSDMIYRRMKMPWLWFDLWYLVFK-----EGRDHKRGLKCLHTFTNNVIAE 271

  Fly   254 RRETLVNNSKETTPEEEVNFLG------QKRRMALLDVLLQST-IDGAPLSDEDIREEVDTFMFE 311
            |       .||...||:....|      :.:|.|.||:||..| .:|..||.|||||||||||||
Mouse   272 R-------VKERKAEEDWTGAGRGPIPSKNKRKAFLDLLLSVTDEEGNRLSQEDIREEVDTFMFE 329

  Fly   312 GHDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRDLGELKFMENVIKESLRLHP 376
            |||||.:||::.||.:..:||||:::.||:.:|.|...: ||||.||.:||:::.||||:||:.|
Mouse   330 GHDTTAAAINWSLYLLGTNPEVQRKVDQELDEVFGRSHR-PVTLEDLKKLKYLDCVIKETLRVFP 393

  Fly   377 PVPMIGRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYFESPDEFRPERFDADVPQ-IHPYAYI 440
            .||:..|..:||.|:.|..:..||...:..:.|.|||.||..|:|||||||..:..| .|||||:
Mouse   394 SVPLFARSLSEDCEVGGYKVTKGTEAIIIPYALHRDPRYFPDPEEFRPERFFPENSQGRHPYAYV 458

  Fly   441 PFSAGPRNCIGQKFAMLEMKSTVSKLLRHF--------ELLPLGPEPRHSMNIVLRSANGVHLGL 497
            |||||||||||||||::|.|:.::.:||.|        |.|.|..:      ::||..||:.:.|
Mouse   459 PFSAGPRNCIGQKFAVMEEKTILACILRQFWVESNQKREELGLAGD------LILRPNNGIWIKL 517

  Fly   498 KPR 500
            |.|
Mouse   518 KRR 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_001284806.1 p450 32..495 CDD:278495 196/485 (40%)
Cyp4v3NP_598730.1 p450 51..517 CDD:278495 196/487 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844926
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 1 1.100 - - LDO PTHR24291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.750

Return to query results.
Submit another query.