DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d2 and LOC100488078

DIOPT Version :9

Sequence 1:NP_001284806.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_012817051.1 Gene:LOC100488078 / 100488078 -ID:- Length:510 Species:Xenopus tropicalis


Alignment Length:503 Identity:186/503 - (36%)
Similarity:282/503 - (56%) Gaps:31/503 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VLLLVAFATLLLWDFLWRR---RGNGILPGPRPLPFLGNLLMYR--GLDPEQIMDFVKKNQRKYG 66
            :|||:..||.|   :|.||   ......|||:.....||...:.  |.|.:.||::.|    ||.
 Frog    23 LLLLLYKATQL---YLKRRFLVAAFSPFPGPKCHWLYGNAHEFNTDGKDMDIIMNYAK----KYP 80

  Fly    67 RLYRVWILHQLA-VFSTDPRDIEFVLSSQQHITKNNL-YKLLNCWLGDGLLMSTGRKWHGRRKII 129
            ..|.:|:.:..| :....|...:.:||.|.  .|::. |..|..|:|.|||:.:|:||...|:::
 Frog    81 YAYPMWLGNFFASLIICHPDYAKAILSRQD--PKDDFGYYFLTPWIGKGLLVLSGQKWFQHRRLL 143

  Fly   130 TPTFHFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICLTALDIIAETAMGTKINAQKN 194
            ||.||:.:|:.:|::....|.||:::.........|:.:|..:.|..||.|.:.|.....|.|.|
 Frog   144 TPAFHYDVLKPYVKLMADCSNVMLDKWDKEISDKKPVELFHHVSLMTLDSIMKCAFSYHSNCQNN 208

  Fly   195 PNLPYVQAVNDVTNILIKRFIHAWQRVDWIFRLTQPTEAKRQDKAIKVMHDFTENIIRERRETLV 259
            ....|::||.:::.::..||.......|:||.|:  ....|..:|:||.||.|:.:|::|:::| 
 Frog   209 SENKYIKAVYELSYLVDHRFTFLPYHSDFIFYLS--PHGFRFRRALKVAHDHTDKVIKQRKKSL- 270

  Fly   260 NNSKETTPEEEVNFLGQKRRMALLDVLL-QSTIDGAPLSDEDIREEVDTFMFEGHDTTTSAISFC 323
                  ..:.|:..:.|||.:..||:|| ....:|..|||||:|.|||||||||||||.|.||:.
 Frog   271 ------HEQNELEKIQQKRHLDFLDILLCAKDENGKGLSDEDLRAEVDTFMFEGHDTTASGISWT 329

  Fly   324 LYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRDLGELKFMENVIKESLRLHPPVPMIGRWFAED 388
            ||.::::||.||:.::|||||||  .|..|...|||::.:....|||||||:||||.|.|...:.
 Frog   330 LYCMAKYPEHQQKCREEIRDVLG--GKQTVDWDDLGKMPYTTLCIKESLRLYPPVPGIARQLTQP 392

  Fly   389 VEI-RGKHIPAGTNFTMGIFVLLRDPEYFESPDEFRPERFDAD-VPQIHPYAYIPFSAGPRNCIG 451
            :.. .|:.:|..:...:.::.:.|....:|.|:.|.|.||.|: ..:.:.:|::|||||.|||||
 Frog   393 ITFCDGRSLPKDSMVLLSLYAINRCSSIWEDPEVFDPMRFSAENSAKRNSHAFLPFSAGSRNCIG 457

  Fly   452 QKFAMLEMKSTVSKLLRHFELLP-LGPEPRHSMNIVLRSANGVHLGLK 498
            |.|||.|||..::..|:.|||.| .|.||..:..:||||.||:||.||
 Frog   458 QNFAMNEMKVALALTLQRFELFPDTGIEPLTAPQLVLRSLNGIHLKLK 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_001284806.1 p450 32..495 CDD:278495 173/470 (37%)
LOC100488078XP_012817051.1 p450 48..502 CDD:278495 173/470 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D214327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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