DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d2 and cyp4b1.3

DIOPT Version :10

Sequence 1:NP_525043.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_002931492.1 Gene:cyp4b1.3 / 100487918 XenbaseID:XB-GENE-980014 Length:516 Species:Xenopus tropicalis


Alignment Length:508 Identity:175/508 - (34%)
Similarity:272/508 - (53%) Gaps:43/508 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VLLLVAFATLLLWDFLWRRRGNGILPGPRPLPFLGNLLMYR--GLDPEQIMDFVKKNQRKYGRLY 69
            :|||.|....:.|..|.....|  .|||......||...:|  |.|.::|:.:.    .||.:.:
 Frog    32 LLLLKACGLFIRWKSLKDALQN--FPGPPKHWLYGNANQFRNDGTDMDRILLWA----NKYPKAF 90

  Fly    70 RVWILHQLA-VFSTDPRDIEFVLSSQQHITKNNLYKLLNCWLGDGLLMSTGRKWHGRRKIITPTF 133
            .:|:....| :..|:|...:...:.....|... |..|..|:|.|||:.:|..|...|:::||.|
 Frog    91 PLWVGQFFASLVITNPEYAKAAFARSDPKTPTG-YDFLIPWIGKGLLVLSGDTWFQHRRLLTPGF 154

  Fly   134 HFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICLTALDIIAETAMGTKINAQKNPNLP 198
            |:.:|:.:.::....:.||:::....::...|:.:|..:.|..||.|.:.|.....|.|.:.:..
 Frog   155 HYDVLKPYAKLISDSTKVMLDKWVPFSNKGEPVELFHHVSLMTLDSIMKCAFSYHSNCQTDNDNS 219

  Fly   199 YVQAVNDVTNILIKR---------FIHAWQRVDWIFRLTQPTEAKRQDKAIKVMHDFTENIIRER 254
            |.:||.|::.:...|         .|:......::||           ||.::.|..|:.:|::|
 Frog   220 YTKAVYDLSYLTHHRARTFPYHNNLIYYLSPHGFLFR-----------KACRIAHQHTDKVIKQR 273

  Fly   255 RETLVNNSKETTPEEEVNFLGQKRRMALLDVLLQSTID-GAPLSDEDIREEVDTFMFEGHDTTTS 318
            : ||:.|      :||...:.|||....||:||.:..: |..|||||:|.|||||||||||||.|
 Frog   274 K-TLLQN------KEEFEKVKQKRHPDFLDILLCARDENGKGLSDEDLRAEVDTFMFEGHDTTAS 331

  Fly   319 AISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRDLGELKFMENVIKESLRLHPPVPMIGR 383
            .||:.||.::::||.||:.::||||||||  |......||.::.:....|||||||:||||.:.|
 Frog   332 GISWILYCMAKYPEHQQKCREEIRDVLGE--KESFEWEDLNKIPYTTMCIKESLRLYPPVPAVSR 394

  Fly   384 WFAEDVEIR-GKHIPAGTNFTMGIFVLLRDPEYFESPDEFRPERFDAD-VPQIHPYAYIPFSAGP 446
            ...:.:... |:.:|||:...:.||.:.|:|..::.|:.|.|.||.:: ..:.|.:|::||:|||
 Frog   395 ELNKPITFSDGRSLPAGSVIFINIFCIHRNPTVWKDPEVFDPLRFSSENSSKRHSHAFVPFAAGP 459

  Fly   447 RNCIGQKFAMLEMKSTVSKLLRHFELLP-LGPEPRHSMNIVLRSANGVHLGLK 498
            ||||||.|||.|:|..|:..|..:||.| |...|..|..:||||.||:|:.||
 Frog   460 RNCIGQNFAMNELKVAVALTLNRYELSPDLSKAPLKSPQLVLRSKNGIHVYLK 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_525043.1 CYP4 66..495 CDD:410721 154/442 (35%)
cyp4b1.3XP_002931492.1 CYP4B-like 76..510 CDD:410771 158/458 (34%)

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