DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d2 and cyp4v2.1

DIOPT Version :9

Sequence 1:NP_001284806.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_002934446.1 Gene:cyp4v2.1 / 100485929 XenbaseID:XB-GENE-22069503 Length:523 Species:Xenopus tropicalis


Alignment Length:536 Identity:217/536 - (40%)
Similarity:320/536 - (59%) Gaps:61/536 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GVVGVLLLVAFATLL-----------LWDFLWRRRGNGILPGPRP-LPFLGNLLMYRGLDPE--- 52
            |.|.:|:.||.|.:|           |.|::.:.:....:|||.| .|.:|:.|.   |.|.   
 Frog     5 GEVHLLVWVAAAVVLLTLLALSILPALQDYVRKWKLMKPIPGPGPNYPIVGDALF---LKPNGGD 66

  Fly    53 ---QIMDFVKKNQRKYGRLYRVWI--LHQLAVFSTDPRDIEFVLSSQQHITKNNLYKLLNCWLGD 112
               |:.:|.:..:.:  .|.::||  :..:.|:..|  .:|.:||:.:|:.|...||.|:.|||.
 Frog    67 FFLQMCEFTESFRSE--PLIKIWIGPIPFIIVYHAD--TVEPILSTSKHMDKAYSYKFLHPWLGK 127

  Fly   113 GLLMSTGRKWHGRRKIITPTFHFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICLTAL 177
            |||.|||.||..|||:|||||||.||.:|:|:.::||.::||:||...||.: .|.|..:.|.||
 Frog   128 GLLTSTGEKWRSRRKMITPTFHFAILSEFLEVMNEQSKILVEKLQKHVDGES-FNCFMDVTLCAL 191

  Fly   178 DIIAETAMGTKINAQKNPNLPYVQAVNDVTNILIKRFIHAWQRVDWIFRLTQPTEAKRQDKAIKV 242
            |||:|||||.||.||.|.:..||.|:..:::|:.:|....|..:|:.:...:  :.|..||.:|:
 Frog   192 DIISETAMGRKIQAQSNRDSEYVHAIYKMSDIIQRRQKMPWLWLDFFYAYLK--DGKEHDKNLKI 254

  Fly   243 MHDFTENIIRERRETLVNNSK------ETTPEEEVNFLGQKRRMALLDVLLQSTID-GAPLSDED 300
            :|.||:..|.||.|.|....:      ::.||.:    ..|:|.|.||:||.:|.| |..:|..|
 Frog   255 LHAFTDKAILERAEELKKMGEQKKEHCDSDPESD----KPKKRSAFLDMLLMATDDAGNKMSYMD 315

  Fly   301 IREEVDTFMFEGHDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGE-DRKSPVTLRDLGELKFM 364
            ||||||||||||||||.:|:::.|:.:..|||.|:::.:|:.:|.|: ||  |||:.||.:|:::
 Frog   316 IREEVDTFMFEGHDTTAAALNWSLFLLGSHPEAQRQVHKELDEVFGKSDR--PVTMDDLKKLRYL 378

  Fly   365 ENVIKESLRLHPPVPMIGRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYFESPDEFRPER-FD 428
            |.||||:||::|.||...|...||..|||.|:|.|.|..:..:.|.||||||..|:|||||| |.
 Frog   379 EAVIKEALRIYPSVPFFARTVTEDCSIRGFHVPKGVNVVIIPYALHRDPEYFPEPEEFRPERFFP 443

  Fly   429 ADVPQIHPYAYIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHF---------ELLPLGPEPRHSMN 484
            .:....:||||||||||.||||||:||::|.|..:|.:||::         :|..||       :
 Frog   444 ENASGRNPYAYIPFSAGLRNCIGQRFALMEEKVVLSSILRNYWVEASQKREDLCLLG-------D 501

  Fly   485 IVLRSANGVHLGLKPR 500
            ::||..:|:.:.||.|
 Frog   502 LILRPQDGMWIKLKNR 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_001284806.1 p450 32..495 CDD:278495 205/489 (42%)
cyp4v2.1XP_002934446.1 p450 45..509 CDD:365848 204/486 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.