DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and CYP86C4

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_172774.1 Gene:CYP86C4 / 837873 AraportID:AT1G13150 Length:529 Species:Arabidopsis thaliana


Alignment Length:474 Identity:125/474 - (26%)
Similarity:206/474 - (43%) Gaps:95/474 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 VWLGPELNVLMGNPKDVEVVL---------GTL---RFNDKAGEYKALEPWLKEGLLVSRGRKWH 128
            |||......:...|.:||.:|         ||.   ||||          .|:||:..:....|.
plant    78 VWLDGSYGAVTCVPANVEYMLKTNFKNFPKGTFFKSRFND----------LLEEGIFNADDDSWK 132

  Fly   129 KRRKIITPAFH--------FKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLCTMD 185
            ::|:||....|        |:.....|.      :.||:.||.  .......|.|.|.....|.|
plant   133 EQRRIIITEMHSTGFVEHSFQTTQHLVR------KKLLKVMES--FAKSQEAFDLQDVFLRLTFD 189

  Fly   186 TICETAMGVSINAQSNADSEYVQAVKTISMVLHKRMF---------NILYRF--------DLTYM 233
            .||...:|        ||.|      |:::.|.:..|         :.|:||        .:.::
plant   190 IICLAGLG--------ADPE------TLAVDLPQVPFAKAFEEATESTLFRFMIPPFIWKPMRFL 240

  Fly   234 LTPLARAEKKALNVLHQFTEKIIVQRREELIREGSSQESSNDDADVGAKRKMAFLDILLQSTVDE 298
            .|...:..:.|:.|:|.|.:|:||.|    |.|...:|:.::.:||        |..::|....:
plant   241 DTGYEKGLRIAVGVVHGFVDKMIVDR----ICELKEEETLDNRSDV--------LSRIIQIESHK 293

  Fly   299 R-----PLSNLDIREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPV 358
            |     |.:....|:...:|:..|.||:|.||.:|.:.|..|||.:.|...|||.::.....:|.
plant   294 RENEIDPSTIRFFRQFCTSFILAGRDTSSVALSWFCWVIQKHPEVENKIICEIREILRQRGDSPT 358

  Fly   359 S-------YELLNQLHYVDLCVKETLRMYPSVPLLGRKVLEDCEI-NGKLIPAGTNIGISPLYLG 415
            |       .:.||.:.|:...:.||||::|.:|:..::.:||..: :|..:..|:.:..|...:|
plant   359 SKNESLFTVKELNNMVYLQAALSETLRLFPPIPMEMKQAIEDDVLPDGTFVRKGSRVYFSIYAMG 423

  Fly   416 RREELFSEP-NIFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEV 479
            |.|.::.:. .||:|||:.........:.:.|:.|:||||.|||:.||.|::|.|.|:||..|.:
plant   424 RMESIWGKDCEIFRPERWIQAGKFVSDDQFKYVVFNAGPRLCIGKTFAYLQMKMIAASVLLRYSI 488

  Fly   480 DFVGDSSEPPVLIAELILR 498
            ..|.|....|.:...|.::
plant   489 KVVQDHVIAPRVTTNLYMK 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 125/474 (26%)
CYP86C4NP_172774.1 CYP86A 73..510 CDD:410687 125/474 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 151 1.000 Domainoid score I1385
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8393
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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