DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d1 and TT7

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_196416.1 Gene:TT7 / 830693 AraportID:AT5G07990 Length:513 Species:Arabidopsis thaliana


Alignment Length:567 Identity:135/567 - (23%)
Similarity:237/567 - (41%) Gaps:123/567 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFLVIGAILASALFVGLLLYHLKFKRLIDLISY----MPGPPVLPLVGHGHHFIGKPPHEMVKKI 61
            :||.|  :||:.||:.|.::..:..|     |:    .|||...|::|:..| :|..||   :.:
plant     4 LFLTI--LLATVLFLILRIFSHRRNR-----SHNNRLPPGPNPWPIIGNLPH-MGTKPH---RTL 57

  Fly    62 FEFMETYSKDQVLKVWLGPELNVLMGNPKDVEVVLGTLRFNDKAGEYKALEPWLK--EGLLVSR- 123
            ...:.||          ||.|::.:|   .|:||:        |......|.:||  :....|| 
plant    58 SAMVTTY----------GPILHLRLG---FVDVVV--------AASKSVAEQFLKIHDANFASRP 101

  Fly   124 --------------------GRKWHKRRKIIT-PAFHFKILDQFVEVFEKGSRDLLRNMEQDRLK 167
                                |.:|...|||.: ..|..|.|:.|..|.::....|.|.:    ::
plant   102 PNSGAKHMAYNYQDLVFAPYGHRWRLLRKISSVHLFSAKALEDFKHVRQEEVGTLTREL----VR 162

  Fly   168 HGDSGFSLYDWINLCTMDTICETAMGVSI-NAQSNADSEYVQAVKTISMVLHKRMFNI------L 225
            .|....:|...:|:|.::.:....:|..: .|.::..::..:::.|..|.| ..:|||      |
plant   163 VGTKPVNLGQLVNMCVVNALGREMIGRRLFGADADHKADEFRSMVTEMMAL-AGVFNIGDFVPSL 226

  Fly   226 YRFDLTYMLTPLARAEKKALNVLHQFTEKIIV--------QRREELIREGSSQESSNDDADVGAK 282
            ...||..:...:.|..|:    ...|...|:.        |:..:::....|.:.::.|.|.|: 
plant   227 DWLDLQGVAGKMKRLHKR----FDAFLSSILKEHEMNGQDQKHTDMLSTLISLKGTDLDGDGGS- 286

  Fly   283 RKMAFLDILLQSTVDERPLSNLDIREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIR 347
                              |::.:|:..:......|.||::|.:.:....:..||:...|..||:.
plant   287 ------------------LTDTEIKALLLNMFTAGTDTSASTVDWAIAELIRHPDIMVKAQEELD 333

  Fly   348 SVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPL-LGRKVLEDCEINGKLIPAGTNIGISP 411
            .|||.|:  ||:...:.||.|:...:||..|::|..|| |.....|.|||||..||.|:.:..:.
plant   334 IVVGRDR--PVNESDIAQLPYLQAVIKENFRLHPPTPLSLPHIASESCEINGYHIPKGSTLLTNI 396

  Fly   412 LYLGRREELFSEPNIFKPERF---------DVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIK 467
            ..:.|..:.:|:|..||||||         ||     |.:.:..|||.||.|.|.|....:..|:
plant   397 WAIARDPDQWSDPLAFKPERFLPGGEKSGVDV-----KGSDFELIPFGAGRRICAGLSLGLRTIQ 456

  Fly   468 AIVANVLRHYEVDFVGDSSEPPVLIAE---LILRTKEPLMFKVRERV 511
            .:.|.:::.::.:..|..:...:.:.|   |.|:...||:...:.|:
plant   457 FLTATLVQGFDWELAGGVTPEKLNMEESYGLTLQRAVPLVVHPKPRL 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 124/523 (24%)
TT7NP_196416.1 PLN02687 2..511 CDD:215371 135/567 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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