DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and LUT1

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_190881.2 Gene:LUT1 / 824479 AraportID:AT3G53130 Length:539 Species:Arabidopsis thaliana


Alignment Length:503 Identity:126/503 - (25%)
Similarity:227/503 - (45%) Gaps:66/503 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 RLIDLISYMPGPPVLPLVGHGHHFIGKPPHEMVKKIFEFMETYSKDQVLKVWLGPELNVLMGNPK 90
            :|.|:...:.|...|||                   :::|..|.  .:.::..||...|::.:|.
plant    85 KLDDVADLLGGALFLPL-------------------YKWMNEYG--PIYRLAAGPRNFVIVSDPA 128

  Fly    91 DVEVVLGTLRFNDKAGEYKALEPWLKEGLLVSRGRKWHKRRKIITPAFHFKILDQFVE-VFEKGS 154
            ..:.||.......|....:..|.....|..::.|..|..||:.:.|:.|.:.|...|| ||.|.:
plant   129 IAKHVLRNYPKYAKGLVAEVSEFLFGSGFAIAEGPLWTARRRAVVPSLHRRYLSVIVERVFCKCA 193

  Fly   155 RDLLRNMEQDRLKHGDSGFSLYDWINL------CTMDTICETAMGVSI---NAQS-NADSEYVQA 209
            ..|:..::    .:.:.|.:    :|:      .|:|.|     |:|:   |..| ..||..::|
plant   194 ERLVEKLQ----PYAEDGSA----VNMEAKFSQMTLDVI-----GLSLFNYNFDSLTTDSPVIEA 245

  Fly   210 VKTISMVLHKRMFNIL--YRFDLTYMLTPLARAEKKALNVLHQFTEKIIVQRREELIREGS--SQ 270
            |.|.......|..::|  ::.|....:.|.....:||:.::.:..|.:|.:.:|.:.|||.  :.
plant   246 VYTALKEAELRSTDLLPYWKIDALCKIVPRQVKAEKAVTLIRETVEDLIAKCKEIVEREGERIND 310

  Fly   271 ESSNDDADVGAKRKMAFLDILLQSTVDERPLSNLDIREEVDTFMFEGHDTTSSALMFFFYNIATH 335
            |...:|||      .:.|..||.|   ...:|::.:|:::.:.:..||:||.|.|.:..|.::.:
plant   311 EEYVNDAD------PSILRFLLAS---REEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKN 366

  Fly   336 PEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKV-LEDCEINGK 399
            ..|.:|..||:..|:  :...| ::|.:.:|.|:..|:.|::|:||..|:|.|:. :.|......
plant   367 SSALRKAQEEVDRVL--EGRNP-AFEDIKELKYITRCINESMRLYPHPPVLIRRAQVPDILPGNY 428

  Fly   400 LIPAGTNIGISPLYLGRREELFSEPNIFKPERFDV--VTTAEKLNPYAYIPFSAGPRNCIGQKFA 462
            .:..|.:|.||...:.|..|::.:...|.|||||:  ....|....:.:||||.|||.|:|.:||
plant   429 KVNTGQDIMISVYNIHRSSEVWEKAEEFLPERFDIDGAIPNETNTDFKFIPFSGGPRKCVGDQFA 493

  Fly   463 MLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEPLMFKVRER 510
            ::|....:|..|:...|:.|.|.:..  :.....:.|...|..||.:|
plant   494 LMEAIVALAVFLQRLNVELVPDQTIS--MTTGATIHTTNGLYMKVSQR 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 121/489 (25%)
LUT1NP_190881.2 PLN02936 56..539 CDD:178524 125/501 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8393
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24291
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.020

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