DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d1 and CYP86C2

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_189243.1 Gene:CYP86C2 / 822212 AraportID:AT3G26125 Length:541 Species:Arabidopsis thaliana


Alignment Length:547 Identity:132/547 - (24%)
Similarity:229/547 - (41%) Gaps:85/547 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SALFVGLLLYHLKFKRLIDLISYMPGPPV-LPLVG-------HGHHFIGKPPHEMVKKIFEFMET 67
            |...:||.|:.....:|.:     .|.|| .|:.|       |.|...|.....:.|....|  .
plant    24 SIALLGLFLFGCLQAKLTN-----KGEPVQWPVFGITPEFFLHVHDMFGWVTRCLTKSRGTF--P 81

  Fly    68 YSKDQVLKVWLGPELNVLMGNPKDVEVVLGTLRFNDKAGEY--KALEPWLKEGLLVSRGRKWHKR 130
            |.     .:|.......:...|.::|.:|.|...|...||:  :.....|::|:..:....|.::
plant    82 YQ-----GIWFSGSYGAMTSVPANIEYMLKTNFKNFPKGEFYKERFRDLLEDGIFNADDESWKEQ 141

  Fly   131 RKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDS------GFSLYDWINLCTMDTICE 189
            |:||....|   ..:||:...:.:|||:   |:..||..:|      .|.|.:.:...|.|.||.
plant   142 RRIIITEMH---STRFVDHSFQTTRDLI---ERKLLKVMESFSKSQEAFDLQEILLRLTFDNICI 200

  Fly   190 TAMGVSINAQSNADSEYVQAVKTISMVLHKRMFNILYR---------FDLTYMLTPLARAEKKAL 245
            ..:|.......: |..:|...|.........:|..:..         ||:.|     .:..::|:
plant   201 AGLGDDPGTLDD-DLPHVPFAKAFEEATESTLFRFMIPPFVWKPMKFFDIGY-----EKGLREAV 259

  Fly   246 NVLHQFTEKIIVQRREELIREGSSQESSNDDADVGAKRKMAFLDILLQSTVDERPLSNLD----- 305
            ..:|.|.:|::|:|...|..:|:...|.:|           .|..|:|....:|...| |     
plant   260 ETVHNFIDKMVVERIAMLKDQGTLANSKSD-----------VLSRLIQIESHKRGDEN-DRFTAK 312

  Fly   306 -IREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVG--------------NDKS 355
             .|:...:|:..|.||:|.||.:||:.|..|||.:.|...|||.::.              .:.|
plant   313 FFRQFCTSFILAGRDTSSVALTWFFWLITKHPEVETKILHEIREILNQREKNKYKLDETGEKESS 377

  Fly   356 TPVSYELLNQLHYVDLCVKETLRMYPSVPL-LGRKVLEDCEINGKLIPAGTNIGISPLYLGRREE 419
            ...:.:.||.:.|:...:.|:||:||.:|: :.:...||...:|..:..|:.:..|...:||.|.
plant   378 RHFTVKELNDMVYLQAALSESLRLYPPIPMEMKQATEEDVFPDGTFLRKGSRVYFSVYAMGRMES 442

  Fly   420 LFSEP-NIFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVG 483
            ::.:. .:|||||:.........:.:.|:.|:||||.|:|:.||.|::|.:.|::|.:|.:....
plant   443 IWGKDCEMFKPERWIQGGQYVSDDQFKYVVFNAGPRLCLGKTFAYLQMKMVAASILLNYSIKVDQ 507

  Fly   484 DSSEPPVLIAELILRTKEPLMFKVRER 510
            |....|.:...|.:  |..|..::..|
plant   508 DHVVVPRVTTTLYM--KHGLKVRITPR 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 126/518 (24%)
CYP86C2NP_189243.1 PLN03195 42..533 CDD:215627 127/529 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 151 1.000 Domainoid score I1385
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8393
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.910

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