DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d1 and cyp4v2.2

DIOPT Version :10

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001072667.1 Gene:cyp4v2.2 / 780124 XenbaseID:XB-GENE-977085 Length:523 Species:Xenopus tropicalis


Alignment Length:516 Identity:212/516 - (41%)
Similarity:307/516 - (59%) Gaps:15/516 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFLVIGAILASALFVGLLLYHLKFKRLIDLISYMPGP-PVLPLVGHGHHFIGKPPHEMVKKIFEF 64
            :::....:|.:.|.:.:|.....:.|...::..:||| |..||:|.. .|:.....:...:|.|:
 Frog    11 VWVAAAVVLLTLLALSILPALQDYVRKRRILKPIPGPGPNYPLIGDA-LFLKNNGGDFFLQICEY 74

  Fly    65 METYSKDQVLKVWLGPELNVLMGNPKDVEVVLGTLRFNDKAGEYKALEPWLKEGLLVSRGRKWHK 129
            .|:|....:||||:|....:::.:...||.||.:.:..|||..||.|.|||.:|||.|.|.||..
 Frog    75 TESYRLQPLLKVWIGTIPFIVVYHADTVEPVLSSSKHMDKAFLYKFLHPWLGKGLLTSTGEKWRS 139

  Fly   130 RRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGD-SGFSLYDWINLCTMDTICETAMG 193
            |||:|||.|||.||.:|:||..:.|:.|:..::    .|.| ..|..:..:.||.:|.|.|||||
 Frog   140 RRKMITPTFHFAILSEFLEVMNEQSKILVEKLQ----THVDGESFDCFMDVTLCALDIISETAMG 200

  Fly   194 VSINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLARAEKKALNVLHQFTEKIIVQ 258
            ..|.||||.|||||||:..:|.::.:|........|..|......:...|.|.:||.||:|.|::
 Frog   201 RKIQAQSNRDSEYVQAIYKMSDIIQRRQKMPWLWLDFLYAHLRDGKEHDKNLKILHSFTDKAILE 265

  Fly   259 RREELIREGSSQESSNDDADVGA---KRKMAFLDILLQSTVDE-RPLSNLDIREEVDTFMFEGHD 319
            |.|||.:.| .|:..:.|:|..:   |::.||||:||.:|.|. ..:|.:|||||||||||||||
 Frog   266 RAEELKKMG-EQKKEHCDSDPESDKPKKRSAFLDMLLMATDDAGNKMSYMDIREEVDTFMFEGHD 329

  Fly   320 TTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVP 384
            ||::||.:..:.:.:|||||::..:|:..|.|. ...||:.:.|.:|.|::..:||:||:|||||
 Frog   330 TTAAALNWSLFLLGSHPEAQRQVHKELDEVFGK-SDRPVTMDDLKKLRYLEAVIKESLRIYPSVP 393

  Fly   385 LLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAEKLNPYAYIPF 449
            |.||.|.|||.|.|..:|.|.|:.|.|..|.|..|.|.||..|:|||| ....|...||||||||
 Frog   394 LFGRTVTEDCSIRGFHVPKGVNVVIIPYALHRDPEYFPEPEEFRPERF-FPENASGRNPYAYIPF 457

  Fly   450 SAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEPLMFKVRER 510
            |||.||||||:||::|.|.:::::||:|.|: .....|...|:.|||||.::.:..|::.|
 Frog   458 SAGLRNCIGQRFALMEEKVVLSSILRNYWVE-ASQKREELCLLGELILRPQDGMWIKLKNR 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 CYP4 73..504 CDD:410721 194/435 (45%)
cyp4v2.2NP_001072667.1 CYP4V 70..512 CDD:410773 198/449 (44%)

Return to query results.
Submit another query.