DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d1 and cyp4v2.2

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001072667.1 Gene:cyp4v2.2 / 780124 XenbaseID:XB-GENE-977085 Length:523 Species:Xenopus tropicalis


Alignment Length:516 Identity:212/516 - (41%)
Similarity:307/516 - (59%) Gaps:15/516 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFLVIGAILASALFVGLLLYHLKFKRLIDLISYMPGP-PVLPLVGHGHHFIGKPPHEMVKKIFEF 64
            :::....:|.:.|.:.:|.....:.|...::..:||| |..||:|.. .|:.....:...:|.|:
 Frog    11 VWVAAAVVLLTLLALSILPALQDYVRKRRILKPIPGPGPNYPLIGDA-LFLKNNGGDFFLQICEY 74

  Fly    65 METYSKDQVLKVWLGPELNVLMGNPKDVEVVLGTLRFNDKAGEYKALEPWLKEGLLVSRGRKWHK 129
            .|:|....:||||:|....:::.:...||.||.:.:..|||..||.|.|||.:|||.|.|.||..
 Frog    75 TESYRLQPLLKVWIGTIPFIVVYHADTVEPVLSSSKHMDKAFLYKFLHPWLGKGLLTSTGEKWRS 139

  Fly   130 RRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGD-SGFSLYDWINLCTMDTICETAMG 193
            |||:|||.|||.||.:|:||..:.|:.|:..::    .|.| ..|..:..:.||.:|.|.|||||
 Frog   140 RRKMITPTFHFAILSEFLEVMNEQSKILVEKLQ----THVDGESFDCFMDVTLCALDIISETAMG 200

  Fly   194 VSINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLARAEKKALNVLHQFTEKIIVQ 258
            ..|.||||.|||||||:..:|.::.:|........|..|......:...|.|.:||.||:|.|::
 Frog   201 RKIQAQSNRDSEYVQAIYKMSDIIQRRQKMPWLWLDFLYAHLRDGKEHDKNLKILHSFTDKAILE 265

  Fly   259 RREELIREGSSQESSNDDADVGA---KRKMAFLDILLQSTVDE-RPLSNLDIREEVDTFMFEGHD 319
            |.|||.:.| .|:..:.|:|..:   |::.||||:||.:|.|. ..:|.:|||||||||||||||
 Frog   266 RAEELKKMG-EQKKEHCDSDPESDKPKKRSAFLDMLLMATDDAGNKMSYMDIREEVDTFMFEGHD 329

  Fly   320 TTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVP 384
            ||::||.:..:.:.:|||||::..:|:..|.|. ...||:.:.|.:|.|::..:||:||:|||||
 Frog   330 TTAAALNWSLFLLGSHPEAQRQVHKELDEVFGK-SDRPVTMDDLKKLRYLEAVIKESLRIYPSVP 393

  Fly   385 LLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAEKLNPYAYIPF 449
            |.||.|.|||.|.|..:|.|.|:.|.|..|.|..|.|.||..|:|||| ....|...||||||||
 Frog   394 LFGRTVTEDCSIRGFHVPKGVNVVIIPYALHRDPEYFPEPEEFRPERF-FPENASGRNPYAYIPF 457

  Fly   450 SAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEPLMFKVRER 510
            |||.||||||:||::|.|.:::::||:|.|: .....|...|:.|||||.::.:..|::.|
 Frog   458 SAGLRNCIGQRFALMEEKVVLSSILRNYWVE-ASQKREELCLLGELILRPQDGMWIKLKNR 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 206/477 (43%)
cyp4v2.2NP_001072667.1 p450 45..509 CDD:365848 206/472 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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