DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and cyp26b1

DIOPT Version :10

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001072655.1 Gene:cyp26b1 / 780112 XenbaseID:XB-GENE-991500 Length:511 Species:Xenopus tropicalis


Alignment Length:518 Identity:120/518 - (23%)
Similarity:199/518 - (38%) Gaps:132/518 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AILASALF-VGLL------LYHLKFKRLIDLISYMP---GPPVLPLVGHGHHFI------GKPPH 55
            |.||:.|. |.||      |:.|::....|....:|   |....||||...|:|      .....
 Frog    13 ATLAACLVSVALLLAVSQQLWQLRWAATRDKSCKLPIPKGSMGFPLVGETFHWILQGSDFQSSRR 77

  Fly    56 EMVKKIFE-------FMETYSKDQVLKVWLGPELNVLMGNPKDVEVVLGTLRFNDKAGEYKALEP 113
            |....:|:       .:.....:.|.|:.:|....|....|:...::||.....:..|:      
 Frog    78 EKYGNVFKTHLLGRPLIRVTGAENVRKILMGEHHLVSTEWPRSTRMLLGPNSLANSIGD------ 136

  Fly   114 WLKEGLLVSRGRKWHKRRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDW 178
                   :.|    || ||:.:..|..:.|:.::...:...:|.||                 .|
 Frog   137 -------IHR----HK-RKVFSKIFSHEALESYLPKIQLVIQDTLR-----------------VW 172

  Fly   179 INLCTMDTICETAMGVSINAQSNADS--EYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLARAE 241
                                .||.:|  .|.:|        .|..|.:..|..|.:.|:.  ...
 Frog   173 --------------------SSNPESINVYCEA--------QKLTFRMAIRVLLGFRLSD--EEL 207

  Fly   242 KKALNVLHQFTEKII--------------VQRREELIR--EGSSQE-----SSNDDADVGAKRKM 285
            .:...|..||.|.:.              ::.||.|::  |.:.||     ...|.||.      
 Frog   208 SQLFQVFQQFVENVFSLPVDVPFSGYRRGIRAREMLLKSLEKAIQEKLQNTQGKDYADA------ 266

  Fly   286 AFLDILLQSTVDE-RPLSNLDIREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIR-- 347
              ||||::|..:. :.|:..::::.....:|..:.||:||.......:..||...:|..||:|  
 Frog   267 --LDILIESGKEHGKELTMQELKDGTLELIFAAYATTASASTSLIMQLLKHPSVLEKLREELRGN 329

  Fly   348 SVVGND--KSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGIS 410
            |::.|.  ....:..|.::.|||:|..:||.||::..|....|.||:..|::|..||.|.::   
 Frog   330 SILHNGCVCEGALRVETISSLHYLDCVIKEILRLFSPVSGGYRTVLQTFELDGFQIPKGWSV--- 391

  Fly   411 PLYLGR----REELFSEPNIFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAI 469
             ||..|    ...:|.:.::|.|:||....|.:|...:.|:||..|.|||:|:..|.|.:|.:
 Frog   392 -LYSIRDTHDTAPVFKDVDVFDPDRFGQDRTEDKDGRFHYLPFGGGVRNCLGKHLAKLFLKVL 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 CYP4 73..504 CDD:410721 100/429 (23%)
cyp26b1NP_001072655.1 CYP26B1 60..489 CDD:410730 105/471 (22%)

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