DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and cyp46a1.3

DIOPT Version :10

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:XP_073789299.1 Gene:cyp46a1.3 / 692332 ZFINID:ZDB-GENE-060519-40 Length:499 Species:Danio rerio


Alignment Length:536 Identity:152/536 - (28%)
Similarity:251/536 - (46%) Gaps:85/536 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LASALFVGLLLY-------HLKFKRLIDLISYMPGPPVLPLVGHGHHFIGKPPHEMVKKIFEFME 66
            |.||:||..|.|       |||:       .::||||      ..:..:|..|  .:.::.: .|
Zfish    13 LLSAVFVVFLAYCLYIHQVHLKY-------DHIPGPP------RDNFLLGHIP--TINRVTK-SE 61

  Fly    67 TYSKDQVLKVW---LGP--ELN------VLMGNPKDVEVVLGTLRFNDKAGEYKAL-----EPWL 115
            .:..| :|.:|   .||  .||      :.:..|:..:.::.:.::......||.|     :.:|
Zfish    62 RHMND-LLLIWAEKYGPVYRLNSFHYVIINVHCPEATKTIMMSPKYLKDPFIYKRLFGLFGKRFL 125

  Fly   116 KEGLLVSRGRK-WHKRRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWI 179
            ..||:.:.... |:::|:|:.|||....|...:..|.:.|..|:..:|:..:....:  .::|.:
Zfish   126 GYGLVTATDHDIWYRQRRIMDPAFSSSYLRGLISTFNEMSERLMDKLEEMAINKTPA--VMHDLV 188

  Fly   180 NLCTMDTICETAMGVSINAQSNADSEYVQAVKTI--SMVLHKRMFNILYRFDLTYMLTP---LAR 239
            |..|:|.||:.|.||.:|.....|:.:.||::..  .|||..|        |......|   .|.
Zfish   189 NCVTLDIICKVAFGVDLNLFKQTDNPFQQAIEQCLQGMVLDLR--------DPFCKFFPKNWKAI 245

  Fly   240 AEKKALNVLHQFTEKIIVQRREELIREGSSQESSNDDADVGAKRKMAFLDILLQSTVDERPLSNL 304
            .|.|...||.:.|.:..:|.|:..:..|  ::..||           .|..:|::..:|:..:..
Zfish   246 QETKGATVLLRKTGEQWIQNRKTAVEIG--EDVPND-----------ILTQILKTAKEEKVNNTK 297

  Fly   305 DIREEVD---TFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQL 366
            |..:.:|   ||...|.:||::.|.|....:..|||..|:...|:..|:|..:.  :|||.|.:.
Zfish   298 DHEQMLDNFVTFFIAGQETTANQLSFAIMELGRHPEIYKRAKAEVDEVLGTKRD--ISYEDLGKF 360

  Fly   367 HYVDLCVKETLRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNIFKPER 431
            .|:...:|||||:||:.|...|.:.||..|||..||.|.::..|.....|.|:.|.:|..|.|||
Zfish   361 TYLSQVLKETLRLYPTAPGTNRWLHEDMVINGIKIPGGISVIFSSYVAQRLEKHFKDPLKFDPER 425

  Fly   432 FDVVTTAEKLNP-YAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFV-GDSSEPPVLIAE 494
            |:|  .|.|  | |.|.|||.|||:|:||.|:.:|.|.::|.:|:.:|...| |.|.|    |.:
Zfish   426 FNV--NAPK--PYYCYYPFSLGPRSCLGQVFSQMEAKVVLAKLLQRFEFSLVPGQSFE----IKD 482

  Fly   495 L-ILRTKEPLMFKVRE 509
            : .||.|..::..:::
Zfish   483 IGTLRPKSGVICNIKQ 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 CYP4 73..504 CDD:410721 134/458 (29%)
cyp46a1.3XP_073789299.1 None

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