DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and cyp3c4

DIOPT Version :10

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001071016.1 Gene:cyp3c4 / 558541 ZFINID:ZDB-GENE-060929-96 Length:507 Species:Danio rerio


Alignment Length:541 Identity:139/541 - (25%)
Similarity:249/541 - (46%) Gaps:85/541 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LVIGAILASALFVGLLLYHLKFKRLIDLISYMPGPPVLPLVGHGHHFIGKPPHEMVKKIFEF-ME 66
            ||:  ::.:.||:..:..|..|.:|     .:|||...|.||....:        .|.:..| ||
Zfish    13 LVV--LVITLLFIYGVWPHRFFIKL-----GIPGPRPWPFVGTLLSY--------AKGLCNFDME 62

  Fly    67 TYSKDQVLKVW--LGPELNVLMGNPKDVEVVLGTL------RFNDKAGEYKALEPWLKEGLLVSR 123
            ...|  ..|||  ....|.:||  ..|:||:...|      .|.::......|.....:|:::.:
Zfish    63 CAKK--YGKVWGIYDGRLPILM--VADLEVIKVVLVKECYSNFINRRKRTTGLAGPFSDGIIMVK 123

  Fly   124 GRKWHKRRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLCTMDTIC 188
            ..:|.:.|..::|.|....|.:...:....:...::||::   |..:....:.:.:...::|.|.
Zfish   124 DERWKRMRSTLSPYFTSGRLKEIFPIAMTHADRFIKNMQK---KDPEQPVKIKEVVAPYSLDVIT 185

  Fly   189 ETAMGVSINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTY--MLTPLARA-----EKKALN 246
            .::..|.|::.:|.:..:|..||..   :...|||.|....|.:  :..||.:.     .|.|::
Zfish   186 SSSFSVDIDSINNPEDPFVINVKKF---IQFNMFNPLLLLILLFPSLAIPLKKMGVTLFSKSAMD 247

  Fly   247 VLHQFTEKIIVQRREELIREGSSQESSNDDADVGAKRKMAFLDILLQ----------STVDERP- 300
            ..:...:||                  .||.:..::.::.||.::||          |...|:| 
Zfish   248 FFYSVLKKI------------------KDDHNKESEGRVDFLKLMLQNQIPDDQIQDSDTSEQPA 294

  Fly   301 --LSNLDIREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKS----TPVS 359
              |::.:|..:...|:..|::|||:.|.|..||:||:|:..:|..|||      ||:    ||::
Zfish   295 KGLTDHEILSQSLVFILGGYETTSTTLTFLLYNLATNPDCLEKLVEEI------DKNFPLDTPIT 353

  Fly   360 YELLNQLHYVDLCVKETLRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEP 424
            |:.|.::.|:::.:.|::|:.|:.|.|.|...:...|||..||.||.:||....|....:::..|
Zfish   354 YDALMRMDYLEMAINESMRLLPTAPRLERSAKKTVVINGLTIPEGTLVGIPTYVLSHDPDIWESP 418

  Fly   425 NIFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPP 489
            ..|:||||.....:|.|. ||:|||..|||||||.::|::.:|..|..:|:::.|:...::..| 
Zfish   419 GEFRPERFSPENKSEFLQ-YAFIPFGLGPRNCIGMRYAVMIMKLFVVKLLQNFSVETCKETQIP- 481

  Fly   490 VLIAELILRTKEPLMFKVRER 510
             |...:..:.|.|:..|:..|
Zfish   482 -LEMNVTFQPKVPITLKLIPR 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 CYP4 73..504 CDD:410721 119/462 (26%)
cyp3c4NP_001071016.1 cytochrome_P450 66..497 CDD:477761 120/467 (26%)

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