DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d1 and cyp4b1.2

DIOPT Version :10

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001017348.1 Gene:cyp4b1.2 / 550102 XenbaseID:XB-GENE-963387 Length:515 Species:Xenopus tropicalis


Alignment Length:507 Identity:180/507 - (35%)
Similarity:283/507 - (55%) Gaps:34/507 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IGAILASALFVGLLL--YHL--KFKRLIDLISYMPGPPVLPLVGHGHHF--IGKPPHEMVKKIFE 63
            ||..:|....|.|||  |.|  :.:|....:...||||...|.||.:.|  .||.    :.::..
 Frog    21 IGQFVALLCVVLLLLKAYALYSRGRRFAAALVPFPGPPAHWLYGHVNQFRRDGKD----LDRLMV 81

  Fly    64 FMETYSKDQVLKVWLGPELNVL-MGNPKDVEVVLGTLRFNDKAGE-YKALEPWLKEGLLVSRGRK 126
            ::..|  .....:|:|.....| :.:|...:||.|  |.:.|... |..|.||:.:|||:..|..
 Frog    82 WVNKY--PNAFPLWIGKFFGTLIITDPDYAKVVFG--RSDPKTSTGYNFLVPWIGKGLLILSGNT 142

  Fly   127 WHKRRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLCTMDTICETA 191
            |.:.|::|||.||:.:|..:|.:....::.:|.  |.|...:.|....|:..::|.|:|:|.:.|
 Frog   143 WFQHRRLITPGFHYDVLKPYVSLISDSTKIMLD--ELDVYSNKDESVELFQHVSLMTLDSIMKCA 205

  Fly   192 MGVSINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLARAEKKALNVLHQFTEKII 256
            .....|.|::.|::|:|||..:|.:..:|:....|..:|.|.|:|.....:||..::|..|:|:|
 Frog   206 FSYHSNCQTDKDNDYIQAVYDLSWLTQQRIRTFPYHSNLIYFLSPHGFRFRKACRIVHLHTDKVI 270

  Fly   257 VQRREELIREGSSQESSNDDADVGAKRKMAFLDILLQSTVDE--RPLSNLDIREEVDTFMFEGHD 319
            .||::.|       ||..:...|..||.:.||||||.|. ||  :.||:.|:|.|||||||||||
 Frog   271 GQRKKLL-------ESKEELEKVQKKRHLDFLDILLCSK-DENGQGLSHEDLRAEVDTFMFEGHD 327

  Fly   320 TTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVP 384
            ||||.:.:..|.:|||||.|:||.|||...:|..::  :.::.||::.|..:|:||:||:||.||
 Frog   328 TTSSGISWILYCMATHPEHQQKCREEISEALGERQT--MEWDDLNRMPYTTMCIKESLRLYPPVP 390

  Fly   385 LLGRKVLEDCEI-NGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAEKLNPYAYIP 448
            .:.|::.:.... :|:.:|||..:.:....:.|...::.:|.||.|.||. ...:.|.:.:|::|
 Frog   391 SVSRELAKPITFHDGRSLPAGMLVSLQIYAIHRNPNVWKDPEIFDPLRFS-PENSSKRHSHAFVP 454

  Fly   449 FSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTK 500
            |:|||||||||.|||.|:|..||..|:.:|:.  .|.|:||:...:|:||:|
 Frog   455 FAAGPRNCIGQNFAMNEMKVAVALTLKRFELS--PDLSKPPLKQPQLVLRSK 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 CYP4 73..504 CDD:410721 159/433 (37%)
cyp4b1.2NP_001017348.1 CYP4B-like 76..510 CDD:410771 160/448 (36%)

Return to query results.
Submit another query.