DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d1 and cyp4f2

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001016020.1 Gene:cyp4f2 / 548774 XenbaseID:XB-GENE-6258041 Length:528 Species:Xenopus tropicalis


Alignment Length:520 Identity:171/520 - (32%)
Similarity:277/520 - (53%) Gaps:40/520 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ASALFVGLLLYHLKFKRLIDLISYM---------PGPPVLP-LVGHGHHFIGKPPHEMVKKIFEF 64
            |..|...|::....||..|.:.:|:         |.||... |:||...|:  |..|.:.:|...
 Frog    26 AVILMFCLIMCRTIFKMAIYIYAYIINARRLRCFPEPPRRSWLLGHLGMFM--PTEEGLTEISSA 88

  Fly    65 METYSKDQVLKVWLGPELNVLMGNPKDVEVVLGTLRFNDKAGE--YKALEPWLKEGLLVSRGRKW 127
            :  .:..:.|..||||...|.:.:|..|:.|:..........|  |..|.|||.:|||:|||.||
 Frog    89 I--CNLRRTLLTWLGPIPEVSLVHPDTVKPVVAASAAIAPKDELFYGFLRPWLGDGLLLSRGEKW 151

  Fly   128 HKRRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLCTMDTICETAM 192
            .:.|:::||||||.||..:|::|.: |.|::....:.....|.....:::.::|.|:||:.:...
 Frog   152 GQHRRLLTPAFHFDILKNYVKIFNQ-STDIMLAKWRRLTAEGPVSLDMFEHVSLMTLDTLLKCTF 215

  Fly   193 GVSINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLARAEKKALNVLHQFTEKIIV 257
            ....:.|.. .|:|:.|:..:|.::.||...:.:.||..|.|:...|..::|...:|:||..::.
 Frog   216 SYDSDCQEK-PSDYISAIYELSSLVVKREHYLPHHFDFIYNLSSNGRKFRQACKTVHEFTAGVVQ 279

  Fly   258 QRREELIREG------SSQESSNDDADVGAKRKMAFLDILLQS-TVDERPLSNLDIREEVDTFMF 315
            ||::.|..:|      |.|..:.|           |:||||.| ..|...||:.|:|.|||||||
 Frog   280 QRKKALQEKGMEEWIKSKQGKTKD-----------FIDILLLSKNEDGSQLSDEDMRAEVDTFMF 333

  Fly   316 EGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMY 380
            ||||||:|.|.:..||:|.|||.|:||.:||..::.......:.::.|::|.:..:|:||:||::
 Frog   334 EGHDTTASGLSWILYNLACHPEYQEKCRKEITELLEGKDIKHLEWDELSKLPFTTMCIKESLRLH 398

  Fly   381 PSVPLLGRKVLEDCEI-NGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAEKLNPY 444
            |.|..:.|:..||.:: .|.::|.|....|:...:....:::..|.::.|.|||.....|: :.|
 Frog   399 PPVVAVIRRCTEDIKLPKGDILPKGNCCIINIFGIHHNPDVWPNPQVYDPYRFDPENLQER-SSY 462

  Fly   445 AYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEPLMFKVRE 509
            |::||||||||||||.|||.|:|.::|.:|.:::|..  |.::......|||||.:..|..:|.|
 Frog   463 AFVPFSAGPRNCIGQNFAMAEMKIVLALILYNFQVRL--DETKTVRRKPELILRAENGLWLQVEE 525

  Fly   510  509
             Frog   526  525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 162/482 (34%)
cyp4f2NP_001016020.1 p450 60..513 CDD:278495 158/472 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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