DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and cyp-25A3

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001040850.1 Gene:cyp-25A3 / 4363046 WormBaseID:WBGene00014697 Length:502 Species:Caenorhabditis elegans


Alignment Length:561 Identity:151/561 - (26%)
Similarity:245/561 - (43%) Gaps:114/561 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FLVIGAILASALFVGLLLYHLKFK----RLIDLISYMPGPPVLPLVGHGHHFIGK-------PPH 55
            ||::.:||.|  .|..::|.:..:    ||...|. :.||....|:|:....|.:       ..:
 Worm     3 FLILTSILVS--LVSFIIYVILARKERFRLRGKIG-LSGPEPHWLMGNLKQIIERKAKLGYDDSY 64

  Fly    56 EMVKKIF-EFMETYSKDQVLKVWLGPELNVLMGNPKDVEVVL--GTLRFNDKAGEYKALEPWLKE 117
            :...|:. :|.||:.      ::.|.:||:.:.|.:|::.|.  ....|:|:.......:..|||
 Worm    65 DWYNKLHKQFGETFG------IYFGTQLNINITNEEDIKEVFIKNFSNFSDRTPPPIIEDNKLKE 123

  Fly   118 GLLVSRGRK-WHKRRKIITPAF------------HFKILDQFVEVF-EKGSRDLLRNMEQDRLKH 168
            .||.:.... |...|..|.|.|            |.|: |.|:|:. ||.|              
 Worm   124 SLLQNTYESGWKHTRSAIAPIFSTGKMKAMHETIHSKV-DLFLEILKEKAS-------------- 173

  Fly   169 GDSG--FSLYDWINLCTMDTICETAMGVSINAQSNA-DSEYVQAVKTISM--VLH---------- 218
              ||  :.:||.....|:|.|.:.|..:..|.|.:. |..||.|.|.|:.  :.|          
 Worm   174 --SGQKWDIYDDFQGLTLDVIGKCAFAIDSNCQRDRNDVFYVNARKFITNIDIRHSKIISTSFLF 236

  Fly   219 ---KRMFNILYRFDLTYMLTPLARAEKKALNVLHQFTEKIIVQRREELIREGSSQESSNDDADVG 280
               .:::.:||||      |.||:||...:..|....|:          |.|.....|.|     
 Worm   237 PELSKLWKVLYRF------TDLAKAEIPLVEGLADVYER----------RRGGEGSDSVD----- 280

  Fly   281 AKRKMAFLDILLQSTVDE-RPLSNLDIREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFE 344
                  .|.:||....|: :|::..::.|....|:..|::|||:|:.:..|.::.:|..|:|.:|
 Worm   281 ------LLKLLLNREDDKSKPMTKQEVIENCFAFLLAGYETTSTAMTYCSYLLSKYPNVQQKLYE 339

  Fly   345 EIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSV-PLLGRKVLEDCEINGKLIPAGTNIG 408
            ||.....|...|   |:.::.:.|:|...|||||.||.| ....|:.|:|..|.|:..|.|..:.
 Worm   340 EIMEAKENGGLT---YDSIHNMKYLDYVYKETLRCYPPVIHFSNRRCLKDITIRGQFYPKGAIVV 401

  Fly   409 ISPLYLGRREELFSEPNIFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANV 473
            ..|..:.|..|.:..|..|.||||:  ...||.:...:|||..|||.|:|.:||.:|.|..:|.:
 Worm   402 CLPHTVHRNPENWDSPEEFHPERFE--NWEEKSSSLKWIPFGVGPRYCVGMRFAEMEFKTTIAKL 464

  Fly   474 LRHYEV-DFVGDSSEPPVLIAE---LILRTKEPLMFKVRER 510
            |..:|: .|.|::.    ||.:   :|:|.|:|:...::.|
 Worm   465 LDTFELKQFEGEAD----LIPDCNGVIMRPKDPVRLHLKPR 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 140/519 (27%)
cyp-25A3NP_001040850.1 p450 37..496 CDD:278495 140/517 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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