DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and Cyp6a18

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001287562.1 Gene:Cyp6a18 / 43304 FlyBaseID:FBgn0039519 Length:507 Species:Drosophila melanogaster


Alignment Length:554 Identity:129/554 - (23%)
Similarity:227/554 - (40%) Gaps:103/554 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFLVIGAILASALFVGLLLYHLK---FKRLIDLISYMPGPPVLPLVGHGHHFIGKPPHEMVKKIF 62
            :|.|..|:||...::    .|.|   |||     ..:|.....||.|:      ...::..:.:.
  Fly     7 LFQVAVALLAIVTYI----LHRKLTYFKR-----RGIPYDKPHPLRGN------MEGYKKTRTVH 56

  Fly    63 EFMETY------SKDQVLKVWL--GPELNVLMGNPKDVEVVLGTL-----RFNDKAGEYKALEPW 114
            |..:.|      ||...:..:|  .|...|:     |:|:....|     .|.||...|...:..
  Fly    57 EIHQEYYNKYRNSKAPFVGFYLFQKPAAFVI-----DLELAKQILIKNFSNFTDKGIYYNEKDDP 116

  Fly   115 LKEGLLVSRGRKWHKRRKIITPAFH-----------FKILDQFVEVF-EKGSRDLLRNMEQDRLK 167
            :...|....|.:|...|..::..|.           ..:.::|:.|. ||.|.:.:.::.     
  Fly   117 MSAHLFNLDGPQWRLLRSKLSSTFTSGKMKFMYPTVVSVAEEFMAVMHEKVSENSILDVR----- 176

  Fly   168 HGDSGFSLYDWINLCTMDTICETAMGVSINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTY 232
                     |.:...|:|.|...|.|:..|:..:..:|::...:  ..:|..|..|::.....:|
  Fly   177 ---------DLVARFTVDVIGTCAFGIKCNSLRDEKAEFLHFGR--RALLDSRHGNLVSGLMRSY 230

  Fly   233 MLTPLARAEKKALNV--LHQFTEKIIVQ----RREELIREGSSQESSNDDAD--VGAKRKMAFL- 288
              ..|||......|.  :.:|.::|:.:    |.:|.|:.       ||..|  :|.|.:.... 
  Fly   231 --PNLARRLGLCRNTAQIQEFYQRIVKETVTLREKENIKR-------NDFMDMLIGLKNQKNMTL 286

  Fly   289 ---DILLQSTVDERPLSNLDIREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVV 350
               :::...|:||       |..:...|...|.||:||.:.|..|.:|.:|..|.|...|:..|:
  Fly   287 ENGEVVKGLTMDE-------IVAQAFVFFIAGFDTSSSTMGFALYELAKNPSIQDKVRAELGQVL 344

  Fly   351 GNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKVLEDCEINGK---LIPAGTNIGISPL 412
             .......:||.:..|.|:|..:.||||.|..||.:.|...:...:.|.   :|.||.::.|...
  Fly   345 -EQHDQKFTYECIKDLKYLDQVINETLRHYTIVPNVDRVAAKRFVVPGNPKFVIEAGQSVIIPSS 408

  Fly   413 YLGRREELFSEPNIFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHY 477
            .:.....::.|||.|:||||....:|::.: .|::||..|||||||.:|..::.:..:|.:::::
  Fly   409 AIHHDPSIYPEPNEFRPERFSPEESAKRPS-VAWLPFGEGPRNCIGLRFGQMQARIGLAMLIKNF 472

  Fly   478 EVDFVGDSSEPPVLI----AELILRTKEPLMFKV 507
              .|...|:.|..|.    :.::|..|..:..||
  Fly   473 --TFSPCSATPDPLTFDPHSAILLGIKGGIQLKV 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 117/515 (23%)
Cyp6a18NP_001287562.1 p450 38..504 CDD:278495 116/512 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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