DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and cyp46a1.4

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:XP_005160404.1 Gene:cyp46a1.4 / 393451 ZFINID:ZDB-GENE-040426-1224 Length:501 Species:Danio rerio


Alignment Length:510 Identity:138/510 - (27%)
Similarity:232/510 - (45%) Gaps:76/510 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LASALFVGLLLYHLKFKRLIDLISYMPGPPVLPLVGHGHHFIGKPPHEMVKKIFEFMETYSKDQV 73
            |.||:|...|.|.|....:.....::||||      ..:...|..| .:.|.:      |:.|.:
Zfish    13 LLSAVFTAFLAYCLYIHYVHQKYDHIPGPP------RDNFLFGHSP-SLTKSM------YADDSL 64

  Fly    74 LK----VW---LGP--ELN------VLMGNPKDVEVVLGTLRFNDKAGEYKAL-----EPWLKEG 118
            :.    .|   .||  .:|      :::..|:..:.:|.:.::......|:.|     :.:|..|
Zfish    65 IHDLFLQWAEKYGPVYRINSLHYIAIVVHCPEATKTILMSPKYTKDPFVYRRLFNLFGKRFLGYG 129

  Fly   119 LLVSRGRK-WHKRRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLC 182
            |:.:.... |:::|:|:.|||....|...:..|::.|..|:..:|:  :.:..:...::|.:|..
Zfish   130 LITAVDHDIWYRQRRIMDPAFSSSYLRSLISTFDEMSERLMDKLEE--MANNKTPAVMHDLVNCV 192

  Fly   183 TMDTICETAMGVSINAQSNADSEYVQAVKTI--SMVLHKRMFNILYRFDLTYMLTPLARAEKKAL 245
            |:|.||:.|.||.:|..:..||.:..||:..  .|.:..|              .|..|...|..
Zfish   193 TLDVICKVAFGVDLNFLAQKDSPFQNAVELCLNGMTVDLR--------------DPFFRLFPKNW 243

  Fly   246 NVLHQFTEKIIVQRR--EELIREGSSQESSNDDADVGAKRKMAFLDILLQ--STVDERPLSNLDI 306
            .::||..:...:.|:  |:.|:...:...:.:|..         .|||.|  .:.:|..::|.|.
Zfish   244 KLIHQIRDAAELLRKTGEKWIQNRKTAVKNGEDVP---------KDILTQILKSAEEENVNNTDD 299

  Fly   307 REEV----DTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLH 367
            .|::    .||...|.:||::.|.|....:..:||..|:...|:..|:|..:.  :|.|.|.:..
Zfish   300 LEQMLDNFVTFFIAGQETTANQLSFAIMALGRNPEIYKRAKAEVDEVLGTKRE--ISNEDLGKFT 362

  Fly   368 YVDLCVKETLRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERF 432
            |:...:|||||:||:.|...|.:.||..|||..||.|.::..|.....|.|:.|.:|..|.||||
Zfish   363 YLSQVLKETLRLYPTAPGTNRWLHEDMVINGIKIPGGCSVMFSSYVSQRLEKFFKDPLKFDPERF 427

  Fly   433 DVVTTAEKLNP-YAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSS 486
            ||  .|.|  | |.|.||:.|||.|:||.|:.:|.|.::|.:|:.:|...|...|
Zfish   428 DV--NAPK--PYYCYFPFALGPRTCLGQVFSQMEAKVVLAKLLQRFEFSLVPGQS 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 131/484 (27%)
cyp46a1.4XP_005160404.1 p450 39..495 CDD:278495 131/484 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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