DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and cyp46a1.4

DIOPT Version :10

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_956773.1 Gene:cyp46a1.4 / 393451 ZFINID:ZDB-GENE-040426-1224 Length:444 Species:Danio rerio


Alignment Length:417 Identity:122/417 - (29%)
Similarity:201/417 - (48%) Gaps:52/417 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 PKDVEVVLGTLRFNDKAGEYKAL-----EPWLKEGLLVSRGRK-WHKRRKIITPAFHFKILDQFV 147
            |:..:.:|.:.::......|:.|     :.:|..||:.:.... |:::|:|:.|||....|...:
Zfish    38 PEATKTILMSPKYTKDPFVYRRLFNLFGKRFLGYGLITAVDHDIWYRQRRIMDPAFSSSYLRSLI 102

  Fly   148 EVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLCTMDTICETAMGVSINAQSNADSEYVQAVKT 212
            ..|::.|..|:..:|:  :.:..:...::|.:|..|:|.||:.|.||.:|..:..||.:..||:.
Zfish   103 STFDEMSERLMDKLEE--MANNKTPAVMHDLVNCVTLDVICKVAFGVDLNFLTQKDSPFQNAVEL 165

  Fly   213 I--SMVLHKRMFNILYRFDLTYMLTP----LARAEKKALNVLHQFTEKIIVQRREELIREGSSQE 271
            .  .|.:..|        |..:.|.|    |.:..:.|..:|.:..||.| |.|:..::.|.   
Zfish   166 CLNGMTVDLR--------DPFFRLFPKNWKLIKQIRDAAELLRKTGEKWI-QNRKTAVKNGE--- 218

  Fly   272 SSNDDADVGAKRKMAFLDILLQ--STVDERPLSNLDIREEV----DTFMFEGHDTTSSALMFFFY 330
                  ||..       |||.|  .:.:|..::|.|..|::    .||...|.:||::.|.|...
Zfish   219 ------DVPK-------DILTQILKSAEEENVNNTDDLEQMLDNFVTFFIAGQETTANQLSFAIM 270

  Fly   331 NIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKVLEDCE 395
            .:..:||..|:...|:..|:|..:.  :|.|.|.:..|:...:|||||:||:.|...|.:.||..
Zfish   271 ALGRNPEIYKRAKAEVDEVLGTKRE--ISNEDLGKFTYLSQVLKETLRLYPTAPGTNRWLHEDMI 333

  Fly   396 INGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAEKLNP-YAYIPFSAGPRNCIGQ 459
            |:|..||.|.::..|.....|.|:.|.:|..|.||||||  .|.|  | |.|.||:.|||.|:||
Zfish   334 IDGIKIPGGCSVMFSSYVSQRLEKFFKDPLKFDPERFDV--NAPK--PYYCYFPFALGPRTCLGQ 394

  Fly   460 KFAMLEIKAIVANVLRHYEVDFVGDSS 486
            .|:.:|.|.::|.:|:.:|...|...|
Zfish   395 VFSQMEAKVVLAKLLQRFEFSLVPGQS 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 CYP4 73..504 CDD:410721 122/417 (29%)
cyp46a1.4NP_956773.1 CYP46A1-like 9..438 CDD:410706 122/417 (29%)

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