DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and cyp46a1.2

DIOPT Version :10

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_956755.3 Gene:cyp46a1.2 / 393433 ZFINID:ZDB-GENE-040426-1184 Length:501 Species:Danio rerio


Alignment Length:509 Identity:140/509 - (27%)
Similarity:234/509 - (45%) Gaps:74/509 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LASALFVGLLLYHLKFKRLIDLISYMPGPPVLPLVGHGHHFIGKPPHEMVKKIFEFMETYSKDQV 73
            |.||:|...|.|.|....|.....::||||      ..:..:|..| .:.|.:      ||.|.:
Zfish    13 LLSAVFTAFLAYCLYIHHLHQKYDHIPGPP------RDNFLLGHSP-SLTKAM------YSDDSL 64

  Fly    74 LK----VW---LGP--ELN------VLMGNPKDVEVVLGTLRFNDKAGEYKAL-----EPWLKEG 118
            :.    .|   .||  .:|      :::..|:..:.:|.:.::......|..|     :.:|..|
Zfish    65 IHDLFLQWAEQYGPVYRINTLHYIAIVVHCPEATKTILMSPKYAKDPFSYSRLFNLFGKRFLGNG 129

  Fly   119 LLVSRGRK-WHKRRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLC 182
            |:.:.... |:::|:|:.|||....|...:..|::.|..|:..:|:  :.:..:...::|.:|..
Zfish   130 LVTAVDHDIWYRQRRIMDPAFSSSYLRSLISTFDEMSERLMDKLEE--MANNKTPAVMHDLVNCV 192

  Fly   183 TMDTICETAMGVSINAQSNADSEYVQAVKTI--SMVLHKRMFNILYRFDLTYMLTPLARAEKKAL 245
            |:|.||:.|.||.:|..:..||.:..||:..  .|.|..|              .||.|...|..
Zfish   193 TLDVICKVAFGVDLNFLAQKDSPFQNAVELCLNGMALDAR--------------DPLFRIFPKNW 243

  Fly   246 NVLHQFTEKIIVQRR--EELIREGSSQESSNDDA--DVGAKRKMAFLDILLQSTVDERPLSNLDI 306
            .::.|..:..::.|:  |:.|:...:...:.:|.  |:        |..:|:...:|...|:.|:
Zfish   244 KLIQQIRDAAVLLRKTGEKWIQNRKTAVKNGEDVPKDI--------LTQILKIAEEENVNSSEDL 300

  Fly   307 REEVD---TFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHY 368
            .:.:|   ||...|.:||::.|.|....:..:||..|:...|:..|:|..:.  :|.|.|.:|.|
Zfish   301 EQMMDNFVTFFIAGQETTANQLSFAIMALGRNPEIYKRAKAEVDEVLGTKRE--ISNEDLGKLTY 363

  Fly   369 VDLCVKETLRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFD 433
            :...:|||||:||:.|...|.:.||..|||..||.|.::..|.....|.|:.|.:|..|.|||||
Zfish   364 LSQVLKETLRLYPTAPGTNRWLHEDMIINGIKIPGGCSVMFSSFVSQRLEKFFKDPLKFDPERFD 428

  Fly   434 VVTTAEKLNP-YAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSS 486
              ..|.|  | |.|.||:.|||.|:||.|:.:|.|.::|.:|:.:|...|...|
Zfish   429 --ENAPK--PYYCYYPFALGPRTCLGQVFSQMEAKVVLAKLLQRFEFSLVPGQS 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 CYP4 73..504 CDD:410721 122/445 (27%)
cyp46a1.2NP_956755.3 None

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