DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d1 and Cyp4d8

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster


Alignment Length:487 Identity:198/487 - (40%)
Similarity:291/487 - (59%) Gaps:19/487 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 ISYMPGPPVLPLVGHGHHFIGKPPHEMVKKIFEFMETYSKDQVLKVWLGPELNVLMGNPKDVEVV 95
            ::.:|||...||:|.....:...|...:|...|::..:...|  :||:...|.::.|:.:..|.:
  Fly    28 VANLPGPICPPLIGAMQLMLRLNPKTFIKVGREYVLKFGHLQ--RVWIFNRLLIMSGDAELNEQL 90

  Fly    96 LGTLRFNDKAGEYKALEPWLKEGLLVSRGRKWHKRRKIITPAFHFKILDQFVEVFEKGSRDLLRN 160
            |.:.....|...||.|..||..|||:|.|:.||:|||||||.|||.||:||||||::.|...::.
  Fly    91 LSSQEHLVKHPVYKVLGQWLGNGLLLSDGKVWHQRRKIITPTFHFSILEQFVEVFDQQSNICVQR 155

  Fly   161 MEQDRLKHGDSGFSLYDWINLCTMDTICETAMGVSINAQSNADSEYVQAVKTISMVLHKRMFNIL 225
            :.|   |...:.|.:|..|....:|.|.|||||..|.||:|..:.|.:||...:.:|..|..::.
  Fly   156 LAQ---KANGNTFDVYRSICAAALDIIAETAMGTKIYAQANESTPYAEAVNECTALLSWRFMSVY 217

  Fly   226 YRFDLTYMLT--PLARAEKKALNVLHQFTEKIIVQRREELIREGSSQESSNDDADVGAKRKMAFL 288
            .:.:|.:.||  .|...:.:.:..:.:||.|:|.:||:.| .:..|:.....|.|||:||:||.|
  Fly   218 LQVELLFTLTHPHLKWRQTQLIRTMQEFTIKVIEKRRQAL-EDQQSKLMDTADEDVGSKRRMALL 281

  Fly   289 DILLQSTVDERPLSNLDIREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGND 353
            |:||.||||.|||:|.:||||||||||||||||:|||.|..:.::.|||.|.|..|||..|:|.|
  Fly   282 DVLLMSTVDGRPLTNDEIREEVDTFMFEGHDTTTSALSFCLHELSRHPEVQAKMLEEIVQVLGTD 346

  Fly   354 KSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKVLEDCE----INGK-LIPAGTNIGISPLY 413
            :|.|||...|.:|.|::..:||:|||||.||::|||:..|.:    ::|. :||||:.|.|....
  Fly   347 RSRPVSIRDLGELKYMECVIKESLRMYPPVPIVGRKLQTDFKYTHSVHGDGVIPAGSEIIIGIFG 411

  Fly   414 LGRREELFSEPNIFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYE 478
            :.|:.|.|..|:.|.|||.:   ...::.|:..||||||||||||||||.||:|.::|.::|.||
  Fly   412 VHRQPETFPNPDEFIPERHE---NGSRVAPFKMIPFSAGPRNCIGQKFAQLEMKMMLAKIVREYE 473

  Fly   479 VDFVGDSSEPPVLIAELILRTKEPLMFKVRER 510
            :..:|...|   .|..::||::......:|:|
  Fly   474 LLPMGQRVE---CIVNIVLRSETGFQLGMRKR 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 196/478 (41%)
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 187/442 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449046
Domainoid 1 1.000 151 1.000 Domainoid score I1385
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 170 1.000 Inparanoid score I1543
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28797
OrthoDB 1 1.010 - - D10482at33392
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 1 1.000 - - mtm8393
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
1010.010

Return to query results.
Submit another query.