DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and Cyp4d20

DIOPT Version :10

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster


Alignment Length:519 Identity:202/519 - (38%)
Similarity:308/519 - (59%) Gaps:28/519 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LVIGAILASALFVGLLLYHLKFKRLIDLI---SYMPGPPVLPLVGHGHHFIGKPPHEMVKKIFEF 64
            |:.||::.      ||.:....||...|.   |.:|||..:|::|.|...:......::..:.|.
  Fly     5 LITGALIL------LLTWDFGRKRQRVLAFEKSAIPGPISIPILGCGLQALHLGAENIIGWVGEK 63

  Fly    65 METYSKDQVLKVWLGPELNVLMGNPKDVEVVLGTLRFNDKAGEYKALEPWLKEGLLVSRGRKWHK 129
            .:.|.|  ..:.|:..|..:...:.:..|.:|.:....:|...|:.|.|:|.:|||||.|||||.
  Fly    64 FDKYGK--TFRFWILGESLIYTKDLQYFETILSSTTLLEKGQLYEYLRPFLNDGLLVSTGRKWHA 126

  Fly   130 RRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLCTMDTICETAMGV 194
            ||||.|.|||||:|:.:||:.::.|..::.|:.  ::..|.:...:..:::|..:|.|.|.||||
  Fly   127 RRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLR--KVADGKTAVDMLKYVSLAALDVITEAAMGV 189

  Fly   195 SINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLA-----RAEKKALNVLHQFTEK 254
            .:|||::.|..|::|:|::..:...|||....|::   .|.|||     |.....:.|:|.||:|
  Fly   190 QVNAQNDPDFPYIKALKSVVYIQPDRMFRFSRRYN---WLFPLAAPLLHRQLLSDIRVMHDFTDK 251

  Fly   255 IIVQRREELIR---EGSSQESSNDDADVGAKRKMAFLDILLQSTVDERPLSNLDIREEVDTFMFE 316
            :|.:|||.:.|   :|:.:..|..||::|:|.:||.|||||||:::.:|||:.||||||||||||
  Fly   252 VISERRETVRRAKADGTYRPLSLGDAEIGSKSQMALLDILLQSSINNQPLSDADIREEVDTFMFE 316

  Fly   317 GHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYP 381
            |.|||||.:....|.||.|||.|::.|||::.|:|.|.|.||:...|..|.|:|..:|||:|:||
  Fly   317 GDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAPVTQAQLQDLKYLDCVIKETMRLYP 381

  Fly   382 SVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAEKLNPYAY 446
            .||.:||...::.||..|.|||.|:|.:...|..|....|.:|..|:|||| :....:..|.:||
  Fly   382 PVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHRDANYFPDPLSFRPERF-LEDQEQGHNTFAY 445

  Fly   447 IPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEPLMFKVRER 510
            :||||||:||||||||:||:|.:::.|||.||:..:|:..:|   :...|||:...:...:|.|
  Fly   446 VPFSAGPKNCIGQKFAVLEMKVLISKVLRFYELLPLGEELKP---MLNFILRSASGINVGLRPR 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 CYP4 73..504 CDD:410721 182/438 (42%)
Cyp4d20NP_647723.2 CYP4 68..501 CDD:410721 183/443 (41%)

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