DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and Cyp4d20

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster


Alignment Length:519 Identity:202/519 - (38%)
Similarity:308/519 - (59%) Gaps:28/519 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LVIGAILASALFVGLLLYHLKFKRLIDLI---SYMPGPPVLPLVGHGHHFIGKPPHEMVKKIFEF 64
            |:.||::.      ||.:....||...|.   |.:|||..:|::|.|...:......::..:.|.
  Fly     5 LITGALIL------LLTWDFGRKRQRVLAFEKSAIPGPISIPILGCGLQALHLGAENIIGWVGEK 63

  Fly    65 METYSKDQVLKVWLGPELNVLMGNPKDVEVVLGTLRFNDKAGEYKALEPWLKEGLLVSRGRKWHK 129
            .:.|.|  ..:.|:..|..:...:.:..|.:|.:....:|...|:.|.|:|.:|||||.|||||.
  Fly    64 FDKYGK--TFRFWILGESLIYTKDLQYFETILSSTTLLEKGQLYEYLRPFLNDGLLVSTGRKWHA 126

  Fly   130 RRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLCTMDTICETAMGV 194
            ||||.|.|||||:|:.:||:.::.|..::.|:.  ::..|.:...:..:::|..:|.|.|.||||
  Fly   127 RRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLR--KVADGKTAVDMLKYVSLAALDVITEAAMGV 189

  Fly   195 SINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLA-----RAEKKALNVLHQFTEK 254
            .:|||::.|..|::|:|::..:...|||....|::   .|.|||     |.....:.|:|.||:|
  Fly   190 QVNAQNDPDFPYIKALKSVVYIQPDRMFRFSRRYN---WLFPLAAPLLHRQLLSDIRVMHDFTDK 251

  Fly   255 IIVQRREELIR---EGSSQESSNDDADVGAKRKMAFLDILLQSTVDERPLSNLDIREEVDTFMFE 316
            :|.:|||.:.|   :|:.:..|..||::|:|.:||.|||||||:::.:|||:.||||||||||||
  Fly   252 VISERRETVRRAKADGTYRPLSLGDAEIGSKSQMALLDILLQSSINNQPLSDADIREEVDTFMFE 316

  Fly   317 GHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYP 381
            |.|||||.:....|.||.|||.|::.|||::.|:|.|.|.||:...|..|.|:|..:|||:|:||
  Fly   317 GDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAPVTQAQLQDLKYLDCVIKETMRLYP 381

  Fly   382 SVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAEKLNPYAY 446
            .||.:||...::.||..|.|||.|:|.:...|..|....|.:|..|:|||| :....:..|.:||
  Fly   382 PVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHRDANYFPDPLSFRPERF-LEDQEQGHNTFAY 445

  Fly   447 IPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEPLMFKVRER 510
            :||||||:||||||||:||:|.:::.|||.||:..:|:..:|   :...|||:...:...:|.|
  Fly   446 VPFSAGPKNCIGQKFAVLEMKVLISKVLRFYELLPLGEELKP---MLNFILRSASGINVGLRPR 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 191/479 (40%)
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 188/469 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449052
Domainoid 1 1.000 151 1.000 Domainoid score I1385
eggNOG 1 0.900 - - E33208_3B9GY
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 170 1.000 Inparanoid score I1543
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28797
OrthoDB 1 1.010 - - D10482at33392
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 1 1.000 - - mtm8393
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
1110.910

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