DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and Cyp28d2

DIOPT Version :10

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_608911.1 Gene:Cyp28d2 / 33748 FlyBaseID:FBgn0031688 Length:501 Species:Drosophila melanogaster


Alignment Length:521 Identity:127/521 - (24%)
Similarity:223/521 - (42%) Gaps:101/521 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FLVIGAILASALFVGLLLYHLKF--KRLIDLISYMPGPPVLPLVGHGHHFIGKPPHEMVKK---I 61
            |||:...|...::| .|.::..:  ||.|......|             |:|..|....:|   .
  Fly     7 FLVLVLTLLVLVYV-FLTWNFNYWRKRGIKTAPTWP-------------FVGSFPSIFTRKRNIA 57

  Fly    62 FEFMETYSK----DQVLKVWLG--PELNVLMGNPKDVEVVLGTLRFNDKAGEY-----KALEPWL 115
            ::..:.|.|    |.::.|:..  |:|.|:.  |:.:..:..|...:....|:     |..:..|
  Fly    58 YDIDDIYEKYKDTDNMVGVFTTRVPQLLVMC--PEYIHKIYATDFRSFHNNEWRNFVNKKTDMIL 120

  Fly   116 KEGLLVSRGRKWHKRRKIITPAF-----------HFKILDQFVEVFEKGSRDLLRNMEQDRLKHG 169
            .....|..|.:|.:||..|.||.           ...:..:|||        .:|..:|.....|
  Fly   121 GNNPFVLTGDEWKERRSEIMPALSPNRVKAVYPVSQSVCKKFVE--------YIRRQQQMATSEG 177

  Fly   170 DSGFSLYDWINLC-TMDTICETAMGVSINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYM 233
            .....|    :|| |.:.:.:..:|||  |||..|:      .|..:.:.||:||..:.|....:
  Fly   178 LDAMDL----SLCYTTEVVSDCGLGVS--AQSFTDT------PTPLLKMIKRVFNTSFEFIFYSV 230

  Fly   234 LTPLARAEKKALNV--LHQFTEKI---IVQRREELIREGSSQESSNDDADVGAKRKMAFLDILLQ 293
            :|.|.:..:|..:|  .::.||..   |::|...|..|  ..|...||          ||:.:||
  Fly   231 VTNLWQKVRKFYSVPFFNKETEVFFLDIIRRCITLRLE--KPEQQRDD----------FLNYMLQ 283

  Fly   294 STVDERPLSNLDIREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPV 358
             ..:::.|...:|.....||:.:|.:||:..|......:..:||.|.|    :|..:|   |..:
  Fly   284 -LQEKKGLHTDNILINTMTFILDGFETTALVLAHIMLMLGRNPEEQDK----VRKEIG---SADL 340

  Fly   359 SYELLNQLHYVDLCVKETLRMYPSVPLLGRKVL----EDCEINGKLI--PAGTNIGISPLYLGRR 417
            :::.:::|.::|.|:.||||:: |..:..||::    |....||:.:  ..|..:.|....|...
  Fly   341 TFDQMSELPHLDACIYETLRLF-SPQVAARKLVTEPFEFANKNGRTVHLKPGDVVTIPVKALHHD 404

  Fly   418 EELFSEPNIFKPERFDVVTTAEKLNPY----AYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYE 478
            .:.:.:|..|||||| :.:....:..|    .|:.|..|||:|.|.:||:.::||.:..:||::|
  Fly   405 PQYYEDPLTFKPERF-LESNGGGMKSYRDRGVYLAFGDGPRHCPGMRFALTQLKAALVEILRNFE 468

  Fly   479 V 479
            :
  Fly   469 I 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 CYP4 73..504 CDD:410721 110/441 (25%)
Cyp28d2NP_608911.1 CYP6-like 74..495 CDD:410679 110/440 (25%)

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