DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and Cyp18a1

DIOPT Version :10

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_523403.2 Gene:Cyp18a1 / 32858 FlyBaseID:FBgn0010383 Length:538 Species:Drosophila melanogaster


Alignment Length:567 Identity:113/567 - (19%)
Similarity:212/567 - (37%) Gaps:152/567 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LFVGLLLYHLKFKRLIDLISYM-----------PGPPVLPLVGHGHHFIGKPPHEMVKKIFEFME 66
            :|:|||       .|:.|:.::           |||..||::|: ..|:|...|   .:..|..:
  Fly    29 VFLGLL-------ALVTLLQWLVRNYRELRKLPPGPWGLPVIGY-LLFMGSEKH---TRFMELAK 82

  Fly    67 TYSKDQVLKVWLGPELNVLMGNPKDVEVVLGTLRFNDKAGEYKALEPWLKE----GLLVSRGRKW 127
            .|.  .:....||.:|.|:|   .|.:::....|..:..|  :...|:::.    |::.|.|:.|
  Fly    83 QYG--SLFSTRLGSQLTVVM---SDYKMIRECFRREEFTG--RPDTPFMQTLNGYGIINSTGKLW 140

  Fly   128 HKRRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLK----------HGDSG--FSLYDWIN 180
            ..:|:.:    |.|:....:.....|.:.:     |.|:.          |...|  ..:...|:
  Fly   141 KDQRRFL----HDKLRQFGMTYMGNGKQQM-----QKRIMTEVHEFIGHLHASDGQPVDMSPVIS 196

  Fly   181 LCTMDTICETAMGVSINAQSNADSEYVQAVKTISMVLHK--RMFNILYRFDLTYMLT-----PLA 238
            :...:.||...|....:..   |.::    :..:.::.:  |:|..::..|  |:.|     .::
  Fly   197 VAVSNVICSLMMSTRFSID---DPKF----RRFNFLIEEGMRLFGEIHTVD--YIPTMQCFPSIS 252

  Fly   239 RAEKKALNVLHQFTEKIIVQRREELIREGSSQESSNDDADVGAKRKMAFLDILLQSTVDE--RPL 301
            .|:.|            |.|.|.|:.|                         ..|..:|:  |..
  Fly   253 TAKNK------------IAQNRAEMQR-------------------------FYQDVIDDHKRSF 280

  Fly   302 SNLDIREEVDTFMFE---------------------------------GHDTTSSALMFFFYNIA 333
            ...:||:.||.::.|                                 |.:|..:.|::....:.
  Fly   281 DPNNIRDLVDFYLCEIEKAKAEGTDAELFDGKNHEEQLVQVIIDLFSAGMETIKTTLLWINVFML 345

  Fly   334 THPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPL-LGRKVLEDCEIN 397
            .:|:..::..:|:..|||..:...:  |.|..|...:..:.|::|....||| .......|.|:|
  Fly   346 RNPKEMRRVQDELDQVVGRHRLPTI--EDLQYLPITESTILESMRRSSIVPLATTHSPTRDVELN 408

  Fly   398 GKLIPAGTNIGISPLY--LGRREELFSEPNIFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQK 460
            |..||||::  :.||.  :.....|:.:|..|:|.|| :.|..:...|..:|||..|.|.|:|..
  Fly   409 GYTIPAGSH--VIPLINSVHMDPNLWEKPEEFRPSRF-IDTEGKVRKPEYFIPFGVGRRMCLGDV 470

  Fly   461 FAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEPLMFKV 507
            .|.:|:....|:.:..:::..  ...:|...:...:..|..|..|||
  Fly   471 LARMELFLFFASFMHCFDIAL--PEGQPLPSLKGNVGATITPESFKV 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 CYP4 73..504 CDD:410721 93/491 (19%)
Cyp18a1NP_523403.2 CYP306A1-like 85..515 CDD:410745 94/498 (19%)

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