DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and Cyp4s3

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster


Alignment Length:508 Identity:201/508 - (39%)
Similarity:304/508 - (59%) Gaps:28/508 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AILASALFVGLLLY---HLKFKRLIDLISYMPGPPVLPLVGHGHHFIGKPPHEMVKKIFEFMETY 68
            |::|..|:...|.|   .|.|.||......:|||.:..|:.:    :.|  .|::..:.|..|.:
  Fly     5 ALVAFVLWAAFLRYLPKILNFLRLQRFAKTLPGPTIGELIAN----VKK--GEILNWLKELREKH 63

  Fly    69 SKDQVLKVWLGPELNVLMGNPKDVEVVLGTLRFNDKAGEYKALEPWLKEGLLVSRGRKWHKRRKI 133
            .  .|.::|.|.:|.|:..:|:|::.:||..:...|:..|:.|||||.:|||.:.|..||:|||:
  Fly    64 G--PVFRIWFGKDLMVMFTDPEDIKQLLGNNQLLTKSRNYELLEPWLGKGLLTNGGESWHRRRKL 126

  Fly   134 ITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLCTMDTICETAMGVSINA 198
            :||.|||:||.:|.|..|:..|.|:|.:   |.|.....|.:|.:|.|..:|.|||||||:..:|
  Fly   127 LTPGFHFRILSEFKEPMEENCRILVRRL---RTKANGESFDIYPYITLFALDAICETAMGIKKHA 188

  Fly   199 QSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLARAEKKALNVLHQFTEKIIVQRREEL 263
            |..:||||||||::|..|:||:.|:...|.::.:..|...:..:.||.|||..|.::|..|||:|
  Fly   189 QLQSDSEYVQAVQSICRVMHKQSFSFWQRLNVFFKHTKPGKEREAALKVLHDETNRVIRLRREQL 253

  Fly   264 IREGSSQESSNDDADVGAKRKMAFLDILLQSTVD-ERPLSNLDIREEVDTFMFEGHDTTSSALMF 327
            |:|.:..:...:..||||||::||||:||.:.:: ...||:.||||||||||||||||||||:.|
  Fly   254 IQERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEGGAELSDTDIREEVDTFMFEGHDTTSSAIAF 318

  Fly   328 FFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKVLE 392
            ....::.:|:.|::.|||...:.|.:|.:         :.|::..:|||||:|||||...|||||
  Fly   319 ALSLLSKNPDVQQRAFEEASELEGREKES---------MPYLEAVIKETLRIYPSVPFFSRKVLE 374

  Fly   393 DCEINGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAEKLNPYAYIPFSAGPRNCI 457
            |.|:....:|.|.:|......|.|..:.|.:|..|.|:||  :...::::|:|:..|||||||||
  Fly   375 DLEVGKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRF--LVNEKQMHPFAFAAFSAGPRNCI 437

  Fly   458 GQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEPLMFKVRER 510
            ||||||||:|..:|.:||.|.  |:.|....|..:|||:.::...:..::..|
  Fly   438 GQKFAMLELKTSLAMLLRSYR--FLPDKDHQPKPLAELVTKSGNGIRLRILPR 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 191/472 (40%)
Cyp4s3NP_573003.2 p450 35..469 CDD:278495 188/457 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460455
Domainoid 1 1.000 151 1.000 Domainoid score I1385
eggNOG 1 0.900 - - E33208_3B9GY
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 170 1.000 Inparanoid score I1543
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28797
OrthoDB 1 1.010 - - D10482at33392
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 1 1.000 - - mtm8393
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
1110.910

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