DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and Cyp4f39

DIOPT Version :10

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_796281.1 Gene:Cyp4f39 / 320997 MGIID:2445210 Length:532 Species:Mus musculus


Alignment Length:524 Identity:172/524 - (32%)
Similarity:288/524 - (54%) Gaps:41/524 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VIGAILASALFVGLLLYHLKFKRLIDL------ISYMPGPPVLP-LVGHGHHFIGKPPHEM---- 57
            |:.|:|...||....|....||...|.      :|..|.||... |:||...::   |:|.    
Mouse    23 VVSALLLLVLFFFFRLLVRAFKLFSDFRITCRKLSCFPEPPGRHWLLGHMSMYL---PNEKGLQN 84

  Fly    58 VKKIFEFMETYSKDQVLKVWLGPELNVL-MGNPKDVEVVLGTLRFNDKAGE--YKALEPWLKEGL 119
            .||:.:.|.     .::..|:||.|.:| :.:|..::.|||.........|  |..|:|||.:||
Mouse    85 EKKVLDTMH-----HIILAWVGPFLPLLVLVHPDYIKPVLGASAAIAPKDEFFYSFLKPWLGDGL 144

  Fly   120 LVSRGRKWHKRRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLCTM 184
            |:|:|.||.:.|:::||||||.||..::::|.:.:..:.....:...:...:.|.:::.|:|.|:
Mouse   145 LISKGNKWSRHRRLLTPAFHFDILKPYMKIFNQCTNIMHAKWRRHLAEGSVTSFDMFEHISLMTL 209

  Fly   185 DTICETAMGVSINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLARAEKKALNVLH 249
            |::.:.....:.:.|... |:|:.::..:|.::.:|.:.:.:..|..|.||...|..::|.:.:|
Mouse   210 DSLQKCVFSYNSDCQERM-SDYISSIIELSALVVRRQYRLHHYLDFMYYLTADGRRFRQACDTVH 273

  Fly   250 QFTEKIIVQRREELIREGSSQESSNDDADVGAK--RKMAFLDILLQSTVDE-RPLSNLDIREEVD 311
            .||.::|.:||:.|.::|:       :|.:.||  :.:.|:|:||.:..:| :.||:.|||.|.|
Mouse   274 NFTTEVIQERRQALRQQGA-------EAWLKAKQGKTLDFIDVLLLAKDEEGKELSDEDIRAEAD 331

  Fly   312 TFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKET 376
            ||||||||||||.|.:..:|:|.:||.|:||.|||:.|:...:...:.::.|.||.:..:|:||:
Mouse   332 TFMFEGHDTTSSGLSWALFNLAKYPEYQEKCREEIQEVMKGRELEELDWDDLTQLPFTTMCIKES 396

  Fly   377 LRMYPSVPLLGRKVLEDCEI-NGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAEK 440
            ||.:|.|.|:.|:..||.:: :|::||.|....:|.........::.:..::.|.||| ..|.::
Mouse   397 LRQFPPVTLISRRCTEDIKLPDGRVIPKGIICLVSIYGTHHNPIVWPDSKVYNPYRFD-PDTPQQ 460

  Fly   441 LNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHY--EVDFVGDSSEPPVLIAELILRTKEPL 503
            .:|.|::||||||||||||.|||.|::.:||..|..:  .||........|    ||||||:..|
Mouse   461 RSPLAFVPFSAGPRNCIGQSFAMAEMRVVVALTLLRFRLSVDRTHKVRRKP----ELILRTENGL 521

  Fly   504 MFKV 507
            ...|
Mouse   522 WLNV 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 CYP4 73..504 CDD:410721 149/439 (34%)
Cyp4f39NP_796281.1 CYP4F 82..523 CDD:410772 153/458 (33%)

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