DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and Cyp4a12a

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_803125.2 Gene:Cyp4a12a / 277753 MGIID:88612 Length:508 Species:Mus musculus


Alignment Length:525 Identity:163/525 - (31%)
Similarity:281/525 - (53%) Gaps:63/525 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LASALFVGLLLY-----HLKFKRLIDLISYMPGPPVLPLVGHGHHFIGKPPHEMVKKIFEFMETY 68
            :||.|.:.|||:     :|..:.|:......|.||...|.||              ||.      
Mouse    21 VASVLSLLLLLFKTAQLYLHRQWLLSSTQQFPSPPSHWLFGH--------------KIL------ 65

  Fly    69 SKDQVLK--------------VWL-GPELNVLMGNPKDVEVVLGTLRFNDKA-GEYKALEPWLKE 117
             |||.|:              .|| |.::.:.:.:|..::::||  |.:.|| |.|:.|.||:..
Mouse    66 -KDQDLQDILTRIKNFPSACPQWLWGSKVRIQVYDPDYMKLILG--RSDPKANGSYRFLAPWIGR 127

  Fly   118 GLLVSRGRKWHKRRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLC 182
            |||:..|:.|.:.|:::|||||:.||..:.|:.....|.:|...||  :...||...::..|.|.
Mouse   128 GLLMLDGQTWFQHRRMLTPAFHYDILKPYTEIMADSVRVMLDKWEQ--IVGQDSTLEIFRHITLM 190

  Fly   183 TMDTICETAMGVSINAQSNAD-SEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLARAEKKALN 246
            |:|||.:.|.....:.|.:.. ..|:|||:.::.::..|:.||.::.|:.|.::........|..
Mouse   191 TLDTIMKCAFSHEGSVQLDRKYKSYIQAVEDLNDLVFSRVRNIFHQNDIIYRVSSNGCKANSACK 255

  Fly   247 VLHQFTEKIIVQRREELIREGSSQESSNDDADVGAKRKMAFLDILLQSTVDE-RPLSNLDIREEV 310
            :.|..|:::|..||.:|..|...::       :..||::.||||||.:.::. :.||:.|:|.||
Mouse   256 LAHDHTDQVIKSRRIQLQDEEELEK-------LKKKRRLDFLDILLFARMENGKSLSDKDLRAEV 313

  Fly   311 DTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKE 375
            |||||||||||:|.:.:.||.:||:||.|::|.:||:|::|:  .|.:::..|:::.|..:|:||
Mouse   314 DTFMFEGHDTTASGISWIFYALATNPEHQQRCRKEIQSLLGD--GTSITWNDLDKMPYTTMCIKE 376

  Fly   376 TLRMYPSVPLLGRKVLEDCEI-NGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAE 439
            .||:||.||.:.|::...... :|:.:|.|.::.:|...|.....::..|.:|.|.||   ....
Mouse   377 ALRIYPPVPSVSRELSSPVTFPDGRSLPKGIHVMLSFYGLHHNPTVWPNPEVFDPSRF---APGS 438

  Fly   440 KLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEPLM 504
            ..:.::::|||.|.|||||::|||.|:|..||..|..:|:  :.|.:..|:.|..::|::|..:.
Mouse   439 SRHSHSFLPFSGGARNCIGKQFAMNELKVAVALTLLRFEL--LPDPTRVPIPIPRIVLKSKNGIH 501

  Fly   505 FKVRE 509
            ..:::
Mouse   502 LHLKK 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 155/490 (32%)
Cyp4a12aNP_803125.2 p450 52..502 CDD:278495 155/488 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845033
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.750

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