DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d1 and Cyp4v3

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001129072.1 Gene:Cyp4v3 / 266761 RGDID:708530 Length:525 Species:Rattus norvegicus


Alignment Length:520 Identity:210/520 - (40%)
Similarity:303/520 - (58%) Gaps:36/520 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VIGAILASALFVGLLLYHLKFKRLIDLISYMPGPPV---LPLVGHGHHFIGKPPH-EMVKKIFEF 64
            |.||.:...:...|:.|..|::::      .|.|.|   .|||||.  ...||.: |..::|.::
  Rat    24 VAGATVLLNILQMLVSYARKWQQM------RPIPSVARAYPLVGHA--LFMKPNNTEFFQQIIQY 80

  Fly    65 METYSKDQVLKVWLGPELNVLMGNPKDVEVVLGTLRFNDKAGEYKALEPWLKEGLLVSRGRKWHK 129
            .|.:....::|:|:||...|.:...::|||:|.:.:..||:..||.|:|||..|||.|.|.||..
  Rat    81 TEEFRHLPIIKLWIGPVPLVALYKAENVEVILTSSKQIDKSFMYKFLQPWLGLGLLTSTGSKWRA 145

  Fly   130 RRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKH-GDSGFSLYDWINLCTMDTICETAMG 193
            |||::||:|||.||:.|::|..:.:..|:..:|    || ....|:.:..|.||.:|.|||||||
  Rat   146 RRKMLTPSFHFTILEDFLDVMNEQANILVNKLE----KHVNQEAFNCFFPITLCALDIICETAMG 206

  Fly   194 VSINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLARAEKKALNVLHQFTEKIIVQ 258
            .:|.||||.|||||:.|..:|.::::||....:.|||.|::....|..||.|..||.||..:|.:
  Rat   207 KNIGAQSNGDSEYVRTVYRMSDMIYRRMKMPWFWFDLWYLMFKEGRDHKKGLKSLHTFTNNVIAE 271

  Fly   259 RREELIREGSSQESSNDDADVG-------AKRKMAFLDILLQSTVDE-RPLSNLDIREEVDTFMF 315
            |       .:::::..|....|       .||| ||||:||..|.:| ..||:.|||||||||||
  Rat   272 R-------VNARKAEQDCIGAGRGPLPSKTKRK-AFLDLLLSVTDEEGNKLSHEDIREEVDTFMF 328

  Fly   316 EGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMY 380
            ||||||::|:.:..|.:.::||.|:|..:|:..|.|. ...||:.|.|.:|.|:|..:|||||::
  Rat   329 EGHDTTAAAINWSLYLLGSNPEVQRKVDKELDDVFGR-SHRPVTLEDLKKLKYLDCVIKETLRVF 392

  Fly   381 PSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAEKLNPYA 445
            |||||..|.:.||||:.|..|..||...|.|..|.|....|.:|..|:|||| ....::..:|||
  Rat   393 PSVPLFARSLSEDCEVAGYKISKGTEAVIIPYALHRDPRYFPDPEEFQPERF-FPENSQGRHPYA 456

  Fly   446 YIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEPLMFKVRER 510
            |:|||||||||||||||::|.|.|:|.:||.:.:: .....|...|..:||||....:..|::.|
  Rat   457 YVPFSAGPRNCIGQKFAVMEEKTILACILREFWIE-SNQKREELGLAGDLILRPNNGIWIKLKRR 520

  Fly   511  510
              Rat   521  520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 202/484 (42%)
Cyp4v3NP_001129072.1 CYP4V 76..515 CDD:410773 191/453 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348393
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24291
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.850

Return to query results.
Submit another query.