DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and Cyp4a29

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001093653.1 Gene:Cyp4a29 / 230639 MGIID:3717143 Length:509 Species:Mus musculus


Alignment Length:515 Identity:157/515 - (30%)
Similarity:279/515 - (54%) Gaps:32/515 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IGAILASALFVGLLL-------YHLKFKRLIDLISYMPGPPVLPLVGHGHHFIGKPPHEMVKKIF 62
            :...|.....:||||       ::|:.:.|:..:...|.||...|.||...|   ...|.::.|.
Mouse    15 VSGFLQVIFLIGLLLLLFKAAQHYLRRQWLLRALYQFPSPPSHWLFGHCLQF---KVDEELRWIL 76

  Fly    63 EFMETYSKDQVLKVWLGPELNVLMGNPKDVEVVLGTLRFNDKAGEYKALEPWLKEGLLVSRGRKW 127
            .::|.:....:..:| |..:.:.:.:|..::|:||  |.:.||..|:.|.|||..||....|.:|
Mouse    77 RYLEKFPGAFLHWIW-GSHVFIKVCDPDYMKVILG--RADPKASLYRFLTPWLGHGLFFLNGDEW 138

  Fly   128 HKRRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLCTMDTICETAM 192
            .:.|:::|||||:.||..:|.:.....:.:|...||  :...|....::..|:|..:|||.:.|.
Mouse   139 FQHRRLLTPAFHYDILKPYVGIMADSVQVMLEKWEQ--IACQDITLEIFHPISLMMLDTIMKYAF 201

  Fly   193 GVSINAQSNADSE-YVQAVKTISMVLHKRMFNILYRFDLTYMLTPLARAEKKALNVLHQFTEKII 256
            ....:.|.:..|: |:|||..::.::..||.|:....|:.|.||..:|....|..:.|:.|::::
Mouse   202 SYQGSVQLDRSSQAYLQAVSDLNNLVTSRMKNVFLHNDIIYNLTSHSRRTNSACQIAHEHTDRVV 266

  Fly   257 VQRREELIREGSSQESSNDDADVGAKRKMAFLDILLQSTVDE-RPLSNLDIREEVDTFMFEGHDT 320
            ..|:.:| ::..|.:.      :..||.:.||||||.|.:|: ..||:..:|.|||:.||.||||
Mouse   267 KLRKAQL-QDNKSMKK------LRGKRCLDFLDILLLSRMDDGSSLSDKALRAEVDSLMFGGHDT 324

  Fly   321 TSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPL 385
            .:|.:.:.||.:||||:.|::|.||::|::|:  .:|::::.|:|:.|..:|:||.||:||.:|.
Mouse   325 PASGISWVFYALATHPDHQQRCREEVQSLLGD--GSPITWDHLHQMPYTTMCIKEALRLYPPIPS 387

  Fly   386 LGRKVLEDCEI-NGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAEKLNPYAYIPF 449
            :|||:...... :|:.:|.|..:.:....|....:::..|.:|.|.||.:.:..   :.:|::||
Mouse   388 VGRKLSTPVTFPDGRSLPKGITVLLHFYALHHNPKVWPNPEVFDPSRFAMNSVQ---HSHAFLPF 449

  Fly   450 SAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEPLMFKVRE 509
            |.|.|||||:..||..:|..||..|..:|:  :.|.|..|:...:|:|::|..:...:|:
Mouse   450 SGGSRNCIGKHLAMNVLKVAVALTLLRFEL--LPDPSRVPIPTQQLVLKSKNGIYLHLRK 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 149/474 (31%)
Cyp4a29NP_001093653.1 p450 52..503 CDD:278495 149/472 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845045
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.750

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