DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and cyp-29A3

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_503130.2 Gene:cyp-29A3 / 189649 WormBaseID:WBGene00021412 Length:503 Species:Caenorhabditis elegans


Alignment Length:504 Identity:173/504 - (34%)
Similarity:272/504 - (53%) Gaps:56/504 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AILASALFVGLLLYHLKFKRLI-DLISY------MPGPPVLPLVGHGHHFIGKPPHEMVKKIFE- 63
            :::...|.:.|||:.:.|.::: :::.|      :||||..|:.|:...|..|...|:.:.:.: 
 Worm     2 SLILPCLLIILLLFIVSFWKIMKNILKYRKYDDLLPGPPAHPIFGNTKTFSNKTTEEIFQALRDL 66

  Fly    64 FMETYSKDQVL---------KVWLGPELNVLMGNPKDVEVVLGTLRFNDKAGEYKALEPWLKEG- 118
            |.|...|.|.|         .||      .|.|  |.|..:|.:....||.|.|:....||..| 
 Worm    67 FSEAVEKGQSLIRHRILGTFYVW------PLDG--KTVSKILESTTELDKGGPYEFFNDWLGGGT 123

  Fly   119 LLVSRGRKWHKRRKIITPAFHFKILDQFVEVFEKGSR---DLLRNMEQDRLKHGDSGFSLYDWIN 180
            ||...|.:|...||::||.|||..|:.:.|||...||   |.|     |:.........|:.:..
 Worm   124 LLEGYGERWRSHRKMLTPTFHFAKLEGYFEVFNTESRVVVDCL-----DKFAKSGETVDLFPFFK 183

  Fly   181 LCTMDTICETAMGVSINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYMLT----PLARAE 241
            .||:||||:||||..::||......|:.|::      ......:||..:..:.:.    .|...:
 Worm   184 RCTLDTICKTAMGAKVDAQLQNSHPYITAIE------QALQLGVLYAMNPHHQIPAIYWALGHQK 242

  Fly   242 KK--ALNVLHQFTEKIIVQRREELIREGSSQESSNDDADVGAKRKMAFLDILLQSTVDERPLSNL 304
            ||  ..|::..||..:|.:||       :::||...:.:. :||.|.|||||| |..:...||..
 Worm   243 KKDEYFNIMKTFTRNVIAERR-------TARESGEVEKET-SKRNMNFLDILL-SNEESSVLSPE 298

  Fly   305 DIREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYV 369
            |:|:|||||||.|||||::::.:..:|:|.||:.|:..:|||.||.|.|.:..|:.|.:.:|.|.
 Worm   299 DLRQEVDTFMFAGHDTTTTSVSWVCWNLAHHPDIQQNVYEEIVSVFGEDPNEDVTTEGIKKLEYT 363

  Fly   370 DLCVKETLRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDV 434
            :..:||:.|:.|:||.:.|:::.|.||.|.|||||.|:.|:|:.:.:...::..|:||.|:||..
 Worm   364 ERMLKESKRICPTVPAVLRQLISDMEIGGVLIPAGANVAIAPMAIHKNANIYQNPDIFDPDRFLP 428

  Fly   435 VTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVG 483
            ..|| |.:.|.:||||||.|||||||||.|..|.:|.::|::::::.:|
 Worm   429 EETA-KRHAYDFIPFSAGLRNCIGQKFAQLNEKVMVIHLLKNFKIEPMG 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 167/469 (36%)
cyp-29A3NP_503130.2 p450 37..477 CDD:278495 167/469 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163484
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H137669
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28797
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100859
Panther 1 1.100 - - O PTHR24291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.760

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