DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and cyp-13A8

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_496115.1 Gene:cyp-13A8 / 188358 WormBaseID:WBGene00011674 Length:509 Species:Caenorhabditis elegans


Alignment Length:553 Identity:119/553 - (21%)
Similarity:233/553 - (42%) Gaps:118/553 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LIDLISY------------MPGPPVLPLVGHGHHFIG---KPPHEMVK------KIFEFMETYSK 70
            ||.:::|            :|||..:|:.|.....:.   .|.:.:.|      ||:.|.|...|
 Worm     7 LISIVTYYFWHWTFWKRRGLPGPWGVPIFGKAGAMLEDSFPPGYTLQKWTKEYGKIYGFTEGMQK 71

  Fly    71 -------DQVLKV-------WLGPELNVLMGNP---KDVEVVLGTLRFNDKAGEYKALEPWLKEG 118
                   |.|.::       :.|.:.|.:.|:|   ||:.:|                       
 Worm    72 VMVISDPDLVQEILVKQYDNFYGRKHNPVQGDPDKDKDIHIV----------------------- 113

  Fly   119 LLVSRGRKWHKRRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLCT 183
              .::|.:|.:.|.|..|||....:.:.:...|..:::|::.:.::  .......:::.:....|
 Worm   114 --GAQGFRWKRLRTITAPAFSNGSIKKVLTTMEDSTQELMKKLREE--SENGKAVNMHLFYQEYT 174

  Fly   184 MDTICETAMGVSINAQSNADSE-----YVQAVKTISMVLHKR----MFNILYRFDLTYMLTPLAR 239
            .|.|...|||       ..||:     .::.||  ....|.|    ||:..:.|.::::.....:
 Worm   175 FDVISRVAMG-------QPDSQMFKNPLLKDVK--GFFEHNRWQIWMFSGGFPFAVSFLKWLFIK 230

  Fly   240 AEKKALNVLHQFTEKIIVQRR-EELIREGSSQESSNDDADVGAKRKMAFLDILL----------- 292
            ..|......      |:||:. .:.:....:|..::....|.......::|:.|           
 Worm   231 VGKFGAGPF------IVVQKSVTDAVMSRIAQREADKKHGVEPGEAADYIDMFLNARAEVEHFGE 289

  Fly   293 -------QSTVDERPLSNLDIREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVV 350
                   .|:.:.|.|:..:|..:...|:..|.|||:.:|.:..|.:|.:|:.|.|..:|:....
 Worm   290 SNDEFHKSSSYNNRQLTTQEIISQCFVFLVAGFDTTAISLSYVTYFLALNPKIQSKLQDEVDKEC 354

  Fly   351 GNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLL-GRKVLEDCEINGKLIPAGTNIGISPLYL 414
            .||:   ::::.|::|.|:|..:||:||::|..... .|:.:.:..|..:::.||.::.|....|
 Worm   355 PNDE---ITFDQLSKLKYMDNVIKESLRLFPFASFANSRRCMRNTVIGEQIVEAGVDVMIDTWTL 416

  Fly   415 GRREELF-SEPNIFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYE 478
            ...:.:: ::...|||||:|...|.::    ||:.|.||||.|:|.:||:||.|.:::::|:.|.
 Worm   417 HHDKNVWGNDVEEFKPERWDSPLTPQQ----AYLSFGAGPRVCLGMRFALLEQKGLLSHILKKYT 477

  Fly   479 VDFVGDSSEPPVLIAELILRTKEPLMFKVRERV 511
            .:....:..|..|:.....| .|.|...::.||
 Worm   478 FETNAKTQLPIKLVGRATAR-PENLFLSLKPRV 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 114/527 (22%)
cyp-13A8NP_496115.1 p450 27..503 CDD:278495 114/525 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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