DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and cyp-13A4

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_496111.1 Gene:cyp-13A4 / 188355 WormBaseID:WBGene00011671 Length:520 Species:Caenorhabditis elegans


Alignment Length:564 Identity:142/564 - (25%)
Similarity:249/564 - (44%) Gaps:107/564 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IGAILASALFVGLLLYHLKFKRLIDLISY-----MPGPPVLPLVG-----HGHHFIGKPPHEMVK 59
            :..::|.|||:|.|.|:      |.:.|:     :.||...|..|     |.:...|      :.
 Worm     3 LSLLIAGALFIGFLTYY------IWIWSFWIRKGVKGPRGFPFFGVILKFHDYENPG------LL 55

  Fly    60 KIFEFMETYSKDQVLKVWLGPELNVLMGNPKDVEVVLGTLRFNDKAGEYKALEPW-------LKE 117
            |:.|:.:.|.  .:..:..|.|..:::.||:.|..|. ..:|::..|  :...|.       .:.
 Worm    56 KLGEWTKKYG--SIYGITEGVEKTLVVSNPEFVHEVF-VKQFDNFYG--RKTNPIQGDPNKNKRA 115

  Fly   118 GLLVSRGRKWHKRRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLC 182
            .|::::|.:|.:.|.:.:|.|..|.|.:.:...|:...:|:|::::...|  .....|.|:....
 Worm   116 HLVLAQGHRWKRLRTLASPTFSNKSLRKIMSTVEETVVELMRHLDEASAK--GKAVDLLDYYQEF 178

  Fly   183 TMDTICETAMGVSINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLT-------YMLTPLARA 240
            |:|.|...|||.:.:....  :..:..||.|.....|..|.|...|.:.       :|..|....
 Worm   179 TLDIIGRIAMGQTESLMFR--NPMLPKVKEIFKKGGKMPFLIAGVFPIAGTLMRQLFMKFPKFSP 241

  Fly   241 EKKALNVLHQFTEKIIVQRREELIREGSSQESSNDDADVGAKRKMAFLDILLQSTVDERPLSNLD 305
            ....:|.:.:...|.:.||..:   :.:..|.|.:..|        |:|:.|    |.|  :|:|
 Worm   242 AFGIMNTMEKALNKRLEQRAAD---KKAGIEPSGEPQD--------FIDLFL----DAR--ANVD 289

  Fly   306 IREEVDT--------------------------FMFEGHDTTSSALMFFFYNIATHPEAQKKCFE 344
            ..||..|                          |:..|:|||:.:|.:..|.:|||||.|||..|
 Worm   290 FIEEESTLGFAKSEVLKVDKHLTFDEIIGQLFVFLLAGYDTTALSLSYSSYLLATHPEIQKKLQE 354

  Fly   345 EIRSVVGNDKSTP---VSYELLNQLHYVDLCVKETLRMYPSVPLL-GRKVLEDCEINGKLIPAGT 405
            |:      |:..|   |:::.:::|.|::..|||.|||||...|: .||.::...:.|..|..||
 Worm   355 EV------DRECPDPEVTFDQISKLKYMECVVKEALRMYPLASLVHNRKCMKKTNVLGVEIDEGT 413

  Fly   406 NIGISPLYLGRREELF-SEPNIFKPERFDVVTTAEKLNPYA---YIPFSAGPRNCIGQKFAMLEI 466
            |:.:....|....::: .:.:.|||||::   |.::|. ||   |:||..|||.|||.:.||:|.
 Worm   414 NVQVDTWTLHYDPKVWGDDASEFKPERWE---TGDELF-YAKGGYLPFGMGPRICIGMRLAMMEE 474

  Fly   467 KAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEPLMFKVRER 510
            |.::.::|:.|..|...::..|..|:....:..:. :|.|:..|
 Worm   475 KLLLTHILKKYTFDTSTETEIPLKLVGSATIAPRN-VMLKLTPR 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 131/524 (25%)
cyp-13A4NP_496111.1 p450 33..514 CDD:278495 131/523 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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