DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and cyp-13A12

DIOPT Version :10

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_499705.1 Gene:cyp-13A12 / 184473 WormBaseID:WBGene00008810 Length:518 Species:Caenorhabditis elegans


Alignment Length:583 Identity:148/583 - (25%)
Similarity:243/583 - (41%) Gaps:159/583 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFLVIGAILASALFVGLLLYHL----KFKRLIDLISYMPGPPVLPLVGHGHHFIG--KPPHEMVK 59
            |.::..|||.|  .:|:|.::|    .:||     ..:.||...|::|.....:.  .||:..:|
 Worm     1 MAIIFLAILTS--IIGVLSFYLWTWSYWKR-----RGIAGPSGYPILGSALEMLSSENPPYLQLK 58

  Fly    60 -------KIFEFMETYSK-------DQVLKVWL-------GPELNVLMGNP-KDVEVVLGTLRFN 102
                   |::...|..|:       |.|.:|::       |.:||.:.|:| ||..|        
 Worm    59 EWTKQYGKVYGITEGLSRTLVISDPDLVQEVFVKQYDNFFGRKLNPIQGDPNKDKRV-------- 115

  Fly   103 DKAGEYKALEPWLKEGLLVSRGRKWHKRRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLK 167
                           .|..|:|.:|.:.|.|.:|.|....|.:.....|:.:.:|||::||    
 Worm   116 ---------------NLFSSQGHRWKRLRTISSPTFSNNSLRKLKTTVEECAVELLRHIEQ---- 161

  Fly   168 HGDSG--FSLYDWINLCTMDTICETAMGVSINAQSNADSE--------YVQAV------------ 210
            |.|.|  ..|.|:....|:|.|...|||       ..||:        ||:||            
 Worm   162 HTDGGQPIDLLDFYQEFTLDVIGRIAMG-------QTDSQMFKNPLLPYVRAVFGEPRKGLFLSG 219

  Fly   211 ---KTISMVLHKRMF---NILYRFDLTYMLTPLARAEKKALNVLHQFTEKIIVQRREELIREGSS 269
               ..|..:|...||   ||:               :..|::|:...:.  .|::|.:|      
 Worm   220 SLAPWIGPILRMVMFSLPNIV---------------KNPAVHVIRHTSN--AVEQRVKL------ 261

  Fly   270 QESSNDDADVGAKRKMAFLDILLQSTVDERPLSN--------LDIREEVDT---------FMFEG 317
             ..:::.|.:.......|:|:.|.:..|:..|.|        :.:..::.|         |:..|
 Worm   262 -RMADEKAGIDPGEPQDFIDLFLDAKSDDVELENNEDFTKAGVKVTRQLTTEEIVGQCFVFLIAG 325

  Fly   318 HDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPS 382
            .|||:.:|.:..:.:||||:.|||..|||.....:.:   |:::.|::|.|::..:|||||||| 
 Worm   326 FDTTALSLSYSSFLLATHPKVQKKLQEEIDRECADPE---VTFDQLSKLKYMECVIKETLRMYP- 386

  Fly   383 VPLLGRKVLEDC-----EINGKLIPAGTNIGISPLYLGRREELFSE-PNIFKPERFDVVTTAEK- 440
               ||......|     :|....|..||||......|...:.::.| ...|||||::   :.:: 
 Worm   387 ---LGALANSRCCMRATKIGNYEIDEGTNILCDTWTLHSDKSIWGEDAEEFKPERWE---SGDEH 445

  Fly   441 -LNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEP 502
             .....||||..|||.|||.:.|.:|.|.:::::||.|.::....:..|..||..   ||.:|
 Worm   446 FYQKGGYIPFGLGPRQCIGMRLAYMEEKLLLSHILRKYTLEVCNKTQIPLKLIGS---RTTQP 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 CYP4 73..504 CDD:410721 127/491 (26%)
cyp-13A12NP_499705.1 CYP3A-like 63..507 CDD:410678 131/514 (25%)

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