DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and cyp-35A4

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_504124.1 Gene:cyp-35A4 / 183622 WormBaseID:WBGene00016786 Length:494 Species:Caenorhabditis elegans


Alignment Length:567 Identity:111/567 - (19%)
Similarity:206/567 - (36%) Gaps:137/567 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFLVIGAILASALFVGLLLYHLKFKRLIDLISYMPGPPVLPLVGHGHHFIGKPPHEMVKKIFEFM 65
            ||::        ||:..:|..|..::...:....|||..|||:|:            :.:||.::
 Worm     1 MFVI--------LFISAILSWLIVRQYQKVSRLPPGPVSLPLIGN------------LPQIFYYL 45

  Fly    66 ETYSK------------DQVLKVWLGPELNVLMGNPKDVEV-----VLGTLRFNDKAGEYKALEP 113
            .|...            ..:..:|:||..:|.:.   |.|:     |....::.||   :.|  |
 Worm    46 WTTGSIVSTLDLFRKRYGNIFTLWVGPLPHVSIA---DYEISHEVFVKNGSKYADK---FHA--P 102

  Fly   114 WLKE-----GLLVSRGRKWHKRRKIITPAFHFKILDQFVEVFEKG-SRDLLRN--MEQDRLKHGD 170
            .:::     |::|:.|..|...|:.....|.           ..| .:|::..  |::...:..:
 Worm   103 VMQDIRKDMGIMVTNGDHWQHMRRFSLQTFR-----------NMGVGKDIMETKIMQELDARCAE 156

  Fly   171 SGFSLYDWINLCTMDTICETAMGVSINA-------QSNADSEYVQAVKTISMVLHKRMFNILYRF 228
            ...|..:.:.:.......|..:|..||:       .:....|:::.::|:...:....|     |
 Worm   157 IDTSAMNGVTVTQASEFFELTVGSIINSILVGKRFDATTKHEFLKIIETMDASIETASF-----F 216

  Fly   229 DLTYMLTPLARAE----------KKALNVLHQFTEKIIVQRREELIREGSSQESSNDDADVGAKR 283
            |   |:.|:...:          ..|..|...|:....::|.:: |:.|......|:..|     
 Worm   217 D---MMVPVWILKTFFKHRYDNLSDAFEVSKAFSAAEAIKRVDQ-IKSGRYFIDENNLQD----- 272

  Fly   284 KMAFLDILLQSTVDERPLSNLD---IREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEE 345
               :.|..|.....|....:.:   ::..:......|.:||::.|:..|..:..|||...|..||
 Worm   273 ---YTDAFLLKIEKEGQCQDFNMETLKTMIGDLWITGQETTTTTLISGFNQLLLHPEVMVKAREE 334

  Fly   346 IRSVVGNDK---------STPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKV-LEDCEINGKL 400
            :..|..|..         |||          |::..:.|..|....:.:...|: .|...:.|..
 Worm   335 LMKVTENGSRSLSLTDRASTP----------YLNAMIGEIQRHASILNVNFWKINKEFTYMGGHP 389

  Fly   401 IPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLE 465
            :.||..:......|...|.:|..|..|.|||:  :.....|.  ..|||..|.|:|:|:..|..|
 Worm   390 VDAGALVTAQLGTLHVNETVFENPLKFDPERY--IRDENLLQ--KVIPFGVGKRSCLGESLARAE 450

  Fly   466 IKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEPLMFKVRERVY 512
            :..|..|:|..|:.:   .||:         |.|.|...:.:.:|.:
 Worm   451 LYLIFGNLLLRYKFE---SSSK---------LSTTELAPYSIGKRPF 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 104/526 (20%)
cyp-35A4NP_504124.1 p450 26..465 CDD:299894 99/500 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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