DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and cyp-29A4

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_505490.2 Gene:cyp-29A4 / 181926 WormBaseID:WBGene00007140 Length:502 Species:Caenorhabditis elegans


Alignment Length:496 Identity:177/496 - (35%)
Similarity:274/496 - (55%) Gaps:40/496 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFLVIGAILASALFVGLLLYHLKFKRLIDLISY---MPGPPVLPLVGHGHHFIGKPPHEMVKKIF 62
            |.::|...|| .|||.||.::...:.:.....|   |||||..|:.|:...|..|...:.|:...
 Worm     1 MSILIPVALA-LLFVYLLSFYDTIRLMRKFWIYGGKMPGPPAHPIFGNASLFKNKTTKDFVELFV 64

  Fly    63 EFM-ETYSK------DQVL-KVWLGPELNVLMGNPKDVEVVLGTLRFNDKAGEYKALEPWLKEGL 119
            :.. |..||      .||: ::::.|.      |.|....:|.:....:|..:|..|.|||..||
 Worm    65 QLAHEARSKGANLMRTQVMNRIYVWPL------NGKTAATILESSTEVNKGDDYAFLVPWLGGGL 123

  Fly   120 LVSRGRKWHKRRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLCTM 184
            |:.:|.||...|:|:||||||..|:.:::||...|:.|:..:|  ::........|:.:...||:
 Worm   124 LMEKGEKWKSHRRILTPAFHFAKLEGYLDVFNSESKILIDCLE--KIAETQETVDLFPFFKRCTL 186

  Fly   185 DTICETAMGVSINAQSNADSEYVQAVK-----TISMVLHKRMFNILYRFDLTYMLTPLARAEKKA 244
            |.||.||||:.::||:..:..|||||:     |:...|:..::|....:.|.|.     :.....
 Worm   187 DIICGTAMGIKLDAQNVHNLGYVQAVEGFNKLTVEYSLNPFLWNRFVYWALGYQ-----KMHDDF 246

  Fly   245 LNVLHQFTEKIIVQRREELIREGSSQESSNDDADVGAKRKMAFLDILLQSTVDERPLSNLDIREE 309
            |..|.:||...||:|| .:|..|..::.:       :||||.||||||.|. :...|::.:||:|
 Worm   247 LYTLKKFTNDAIVERR-TVIASGEIEKET-------SKRKMNFLDILLNSE-ESNELTSDEIRKE 302

  Fly   310 VDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVK 374
            ||||||.||||||::|.:..:|||.:||.|:..::||.|:.|.|.:..|:.|.:|:|.|.:..:|
 Worm   303 VDTFMFAGHDTTSTSLSWLCWNIAHNPEVQENVYKEIISIFGEDPNQDVTSENINRLEYTERVLK 367

  Fly   375 ETLRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAE 439
            |:.||:|.||...||:.:|..|:|..||:..||.|||..|.....::..|..|.|:|| :.....
 Worm   368 ESKRMFPPVPGFQRKLTKDIVIDGITIPSEGNITISPTVLHCNPFVYQNPEKFDPDRF-LPEECA 431

  Fly   440 KLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVD 480
            |.:.|.|||||||.||||||||::|..|.::.::||:::::
 Worm   432 KRHSYDYIPFSAGLRNCIGQKFSILNEKVMLIHILRNFKLE 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 166/459 (36%)
cyp-29A4NP_505490.2 p450 37..473 CDD:278495 166/459 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163496
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H137669
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28797
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100859
Panther 1 1.100 - - O PTHR24291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.760

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