DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d1 and cyp-42A1

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_507688.2 Gene:cyp-42A1 / 180236 WormBaseID:WBGene00013585 Length:511 Species:Caenorhabditis elegans


Alignment Length:519 Identity:195/519 - (37%)
Similarity:299/519 - (57%) Gaps:30/519 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IGAILASALFVGLL-LYHLKFKR---LIDLISYMPGPPVLPLVGHGHHFIGKPPHEMVKKIFE-- 63
            :|.|.||.:.:.:. :.|..|::   :.:.::...||..|||:|:.|.|     |...::.||  
 Worm     1 MGIITASLIVLTITWIIHFAFRKAKFIYNKLTVFQGPAALPLIGNFHQF-----HFSPEEFFEQS 60

  Fly    64 ----FMETYSKDQVLKVWLGPELNVLMGNPKDVEVVLGTLRFNDKAGEYKALEPWLKEGLLVSRG 124
                :|.....:::.:||||....||:....:||.:||:.:..:|...|..|..|:.:|||:|:.
 Worm    61 QGIAYMMRKGDERITRVWLGGLPFVLLYGAHEVEAILGSPKMLNKPFLYGFLSAWIGDGLLISKP 125

  Fly   125 RKWHKRRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFS-LYDWINLCTMDTIC 188
            .||..|||::||.||:.||..||||:.:..|.||...|   .:.|...:| ::..|.|||:|.||
 Worm   126 DKWRPRRKLLTPTFHYDILKDFVEVYNRHGRTLLSKFE---AQAGTGEYSDVFHTITLCTLDVIC 187

  Fly   189 ETAMGVSINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLARAEKKALNVLHQFTE 253
            |.|:|.|||||.:..|.|:.||..:..::.:|:....|..|..:.|....:...:.:.:||:||.
 Worm   188 EAALGTSINAQKDPHSPYLDAVFKMKDIVFQRLLRPHYFSDTIFNLIGPGKEHDECVKILHEFTS 252

  Fly   254 KIIVQRREELIREGSSQESSNDDADVGAKRKMAFLDILL-QSTVDERPLSNLDIREEVDTFMFEG 317
            |.|..|:.::...|..::....:...| :|:|||||::| .::..|.|:..  |.||||||.|||
 Worm   253 KAIYARKAKVDAAGGVEQLLAQETAEG-RRRMAFLDLMLDMNSKGELPMEG--ICEEVDTFTFEG 314

  Fly   318 HDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPS 382
            |||||:|:.:|.:.:..:||.|.|..:||..|:| :...|||||.|.:|.|::.|.|||||:|||
 Worm   315 HDTTSAAMNWFLHLMGANPEIQSKVQKEIDEVLG-EADRPVSYEDLGKLKYLEACFKETLRLYPS 378

  Fly   383 VPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAEKLNPYAYI 447
            |||:.|:.:||.::.|..:|:||.:.:.|..:.:....:.:|.||.||||   .|.|..:|||||
 Worm   379 VPLIARQCVEDIQVRGHTLPSGTAVVMVPSMVHKDPRYWDDPEIFNPERF---ITGELKHPYAYI 440

  Fly   448 PFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRT--KEPLMFKVRE 509
            |||||.|||||.:|||:|.|.|:|.:|::.:|.....:.|..| .||||:|.  ...|.|:.||
 Worm   441 PFSAGSRNCIGMRFAMMEEKCILAIILKNLKVKAKLRTDEMRV-AAELIIRPLYGNELKFEKRE 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 187/481 (39%)
cyp-42A1NP_507688.2 p450 35..499 CDD:278495 186/479 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 1 1.000 - - otm14469
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.920

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