DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and cyp-29A2

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_505847.1 Gene:cyp-29A2 / 179550 WormBaseID:WBGene00011830 Length:503 Species:Caenorhabditis elegans


Alignment Length:489 Identity:168/489 - (34%)
Similarity:275/489 - (56%) Gaps:27/489 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFLVIGAILASALFVGLLLYHLKFKRLIDLISYMPGPPVLPLVGHGHHFIGKPPHEMVKKIFEFM 65
            :|:.|...:..|.....:...||:||.....|.:||||..|:.|:....:||...:: ..:|...
 Worm     3 IFIPISIAIILAYLATWIPTLLKYKRHWQYGSKLPGPPAHPIFGNLGPIVGKKTEDL-PSVFINW 66

  Fly    66 ETYSKDQ---VLKVWLGPELNVLMGNPKDVEVVLGTLRFNDKAGEYKALEPWLKEGLLV-SRGRK 126
            ....:||   |::|.:..::.....|.|....::.:....:|..:|:..:|||..|||: ..|.:
 Worm    67 AAEQRDQGHSVMRVMILGKVYAWPLNGKAAAAIIDSTTETNKGDDYRFFDPWLGGGLLLEGYGER 131

  Fly   127 WHKRRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLCTMDTICETA 191
            |...||::||||||..|..:.|||...|: :|.::..|....|:: ..::.::..|.:|.|.|||
 Worm   132 WKSHRKMLTPAFHFAKLGGYFEVFNNESK-ILIDLLSDFSASGET-VDIFPYVKRCALDIISETA 194

  Fly   192 MGVSINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLARAEKKALNVLHQFTEKII 256
            ||:.|:||.|.|.:|||||:..:.:.....||...:....:..|.........|:.|...|||:|
 Worm   195 MGIKIDAQINHDHKYVQAVEGYNKIGVLVSFNPHLKNQFIFWATGYKAQYDDYLSTLKSMTEKVI 259

  Fly   257 VQRREELIREGSSQESSNDDADV---GAKRKMAFLDILLQSTVDERPLSNLDIREEVDTFMFEGH 318
            .:||           :::|..:|   .:||.|.|||::| |..:...|::.|||:|||||||.||
 Worm   260 KERR-----------AAHDSGEVEKETSKRMMNFLDLML-SMEESNQLTSEDIRQEVDTFMFAGH 312

  Fly   319 DTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSV 383
            |||:|:..:..:|:|.:|..|:|.::|:..|.|:|.:|.::.|.:|.|:|:|:.:||:.|:...|
 Worm   313 DTTTSSTSWACWNLAHNPNVQEKVYKEMIEVFGDDPNTDITLENVNNLNYLDIVLKESKRIIAPV 377

  Fly   384 PLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERF--DVVTTAEKLNPYAY 446
            |.|.||:..|.||:|.::|||.|:.|||:.|.....:|..|..|.|:||  |.|:   |.:||.:
 Worm   378 PALQRKLTNDLEIDGYIVPAGGNVTISPMVLHSNHHVFKNPTEFNPDRFLPDEVS---KRHPYDF 439

  Fly   447 IPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVD 480
            :||.||||||||||||.|..|.::::::|:::::
 Worm   440 MPFLAGPRNCIGQKFAQLNEKVMISHIVRNFKIE 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 160/455 (35%)
cyp-29A2NP_505847.1 p450 37..495 CDD:278495 160/455 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H137669
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28797
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.920

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