DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and cyp-25A2

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_497776.2 Gene:cyp-25A2 / 175495 WormBaseID:WBGene00007964 Length:502 Species:Caenorhabditis elegans


Alignment Length:574 Identity:144/574 - (25%)
Similarity:239/574 - (41%) Gaps:142/574 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LVIGAILASALFVGLLLYHL-------KFKRLIDLISYMPGPPVLPLVGHGHHFIGKPPHEMVKK 60
            |::.:||  .|.|..::|.|       |.:..|.|..  |.|         |.|:|.     :|:
 Worm     4 LILTSIL--ILLVSFIIYILFARREQFKLREKIGLTG--PEP---------HWFMGN-----LKQ 50

  Fly    61 IFEFMETYSKD--------------QVLKVWLGPELNVLMGNPKDVEVVL--GTLRFNDKAGEYK 109
            |.:..|....|              :...::.|.::|:::.|.:|::.|.  ....|:|     :
 Worm    51 IVDRKEKLGYDDSNKWFNELHKQYGETFGIYFGAQMNIVLSNEEDIKEVFIKNFSNFSD-----R 110

  Fly   110 ALEP-----WLKEGLLVSR-GRKWHKRRKIITPAF------------HFKILDQFVEVF-EKGSR 155
            .:.|     .|.:.||.:. ...|...|..|.|.|            |.|: |.|:::. ||.| 
 Worm   111 IVPPIFDSNQLNQSLLQNTYATGWKHTRSAIAPIFSTGKMKAMQETIHSKV-DLFLDILREKAS- 173

  Fly   156 DLLRNMEQDRLKHGDSG--FSLYDWINLCTMDTICETAMGVSINAQSNA-DSEYVQAVKTISM-- 215
                           ||  :.:|:.....|:|.|.:.|..:..|.|.:. |..||.|.|.|:.  
 Worm   174 ---------------SGQKWDIYEDFQGLTLDVIGKCAFAIDSNCQRDRNDVFYVNARKFIANID 223

  Fly   216 VLHKR-------------MFNILYRFDLTYMLTPLARAEKKALNVLHQFTEKIIVQRREELIREG 267
            :.|.:             ::..||::      ||||.||...:..|....|:          |.|
 Worm   224 IRHSKVIAASFILPELAPLWRALYKY------TPLADAEIPLVEGLSNVYER----------RRG 272

  Fly   268 SSQESSNDDADVGAKRKMAFLDILLQSTVDE-RPLSNLDIREEVDTFMFEGHDTTSSALMFFFYN 331
            .....|.|           .|.:||....|: :|::..::.|....|:..|::|||:|:.:..|.
 Worm   273 GEGSDSVD-----------LLKLLLNREDDKSKPMTKQEVIENCFAFLLAGYETTSTAMTYCSYL 326

  Fly   332 IATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSV-PLLGRKVLEDCE 395
            ::.:|..|:|.:|||.....|...|   |:.::.:.|:|...|||||.||.| ..:.|:.|.|..
 Worm   327 LSKYPNVQQKLYEEIMEAKENGGLT---YDSIHNMKYLDYVYKETLRCYPPVIHFINRRCLADIT 388

  Fly   396 INGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQK 460
            |.|:..|.|:.:...|..:....|.:..|..|.||||:  ...||.:...:|||..|||.|:|.:
 Worm   389 IRGQFYPKGSVVTCLPHTVHLNPENWDSPEEFHPERFE--NWEEKSSSLKWIPFGVGPRYCVGMR 451

  Fly   461 FAMLEIKAIVANVLRHYEV-DFVGDSSEPPVLIAE---LILRTKEPLMFKVRER 510
            ||.:|.|..:..:|..:|: .|.|::.    ||.:   :|:|.|:|:...::.|
 Worm   452 FAEMEFKTTIVKLLDTFELKQFKGEAD----LIPDCNGVIMRPKDPVRLLLKPR 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 133/530 (25%)
cyp-25A2NP_497776.2 p450 38..498 CDD:278495 133/533 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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