DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d1 and Cyp4f13

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_570952.1 Gene:Cyp4f13 / 170716 MGIID:2158641 Length:523 Species:Mus musculus


Alignment Length:525 Identity:180/525 - (34%)
Similarity:278/525 - (52%) Gaps:51/525 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LVIGAILASALFVGLLLYHLKFKRLIDLISYMPGPPVLPLVGHGHHFIGKPPHEMVKKIFEFMET 67
            |::|.  ||.:...:|.:...|......:...|.|| .|....||..:.|...|.:    :|:..
Mouse    22 LLLGG--ASWILARILAWIYAFYDNCSRLRCFPQPP-KPSWFWGHLALMKNNEESM----QFITH 79

  Fly    68 YSKD--QVLKVWLGPELNVL-MGNPKDVEVVLG----------TLRFNDKAGEYKALEPWLKEGL 119
            ...|  .|...|:||...:| :.:|..:..:|.          ||        |..|:|||.:||
Mouse    80 LGHDFHDVHLSWVGPVYPILRLVHPNFIAPLLQASAAVAPKEMTL--------YGFLKPWLGDGL 136

  Fly   120 LVSRGRKWHKRRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLCTM 184
            |:|.|.||...|:::||||||.||..:|::|.| |.:::....|.....|.|...:::.|:|.|:
Mouse   137 LMSAGDKWSHHRRLLTPAFHFDILKSYVKIFNK-SVNIMHAKWQCLASKGTSRLDMFEHISLMTL 200

  Fly   185 DTICETAMGVSINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLARAEKKALNVLH 249
            |::.:....|..|.| .:||:|:.|:..:|.::.||........||.|.||...|..:||.:::|
Mouse   201 DSLQKCIFSVDSNCQ-ESDSKYIAAILELSSLVVKRHRQPFLYLDLLYYLTADGRRFRKACDLVH 264

  Fly   250 QFTEKIIVQRREELIREGSSQESSNDDADVGAKRK-MAFLDILLQSTVDE--RPLSNLDIREEVD 311
            .||:.:|.:||..|..:|.      :.....||.| :.|:|:||.:. ||  :.|||.|||.|.|
Mouse   265 NFTDAVIKERRSTLNTQGV------EFLKAKAKTKTLDFIDVLLMAE-DEHGKGLSNEDIRAEAD 322

  Fly   312 TFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKET 376
            ||||.|||||:|||.:..||:|.|||.|::|.:|::.::.:..|..:.::.|.||.::.:|:||:
Mouse   323 TFMFGGHDTTTSALSWILYNLARHPEYQERCRQEVQELLRDRDSEEIEWDDLAQLPFLTMCIKES 387

  Fly   377 LRMYPSVPLLGRKVLEDCEI-NGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAEK 440
            ||::|.|.|:.|...:|..: :|:.||.|....||...:.....::.:|.::.|.||| ....:|
Mouse   388 LRLHPPVLLISRCCTQDVLLPDGRAIPKGNICVISIFGVHHNPSVWPDPEVYNPFRFD-PENPQK 451

  Fly   441 LNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEP---PVLIAELILRTKEP 502
            .:|.|:||||||.||||||.|||.|||..:|..|..:.:  :.|..||   |    |||||.:..
Mouse   452 RSPLAFIPFSAGTRNCIGQTFAMSEIKVALALTLLRFRI--LPDDKEPRRKP----ELILRAEGG 510

  Fly   503 LMFKV 507
            |..:|
Mouse   511 LWLRV 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 173/491 (35%)
Cyp4f13NP_570952.1 p450 52..513 CDD:278495 173/489 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845161
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.750

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