DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and Cyp3a62

DIOPT Version :10

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001019403.1 Gene:Cyp3a62 / 170509 RGDID:1595919 Length:497 Species:Rattus norvegicus


Alignment Length:529 Identity:148/529 - (27%)
Similarity:263/529 - (49%) Gaps:71/529 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ILASALFVGLLLY----HLKFKRLIDLISYMPGPPVLPLVG------HGHHFIGKPPHEMVKKIF 62
            :|.:.:.|.|.||    |..||:|     .:.||..||.||      ||.....:..|:....|:
  Rat    13 MLLATILVLLYLYGTSTHGNFKKL-----GISGPKPLPFVGNILAYRHGFWEFDRHCHKKYGDIW 72

  Fly    63 EFMETYSKDQVLKVWLGPEL--NVLMGNPKDVEVVLGTLRFNDKAGEYKALEPWLKEGLLVSRGR 125
            .|.|  .:..:|.: ..|::  .||:   |:........|....||       .||:.:.:|...
  Rat    73 GFYE--GRQPILAI-TDPDIIKTVLV---KECYSTFTNRRSFGPAG-------ILKKAITLSEDE 124

  Fly   126 KWHKRRKIITPAF-------HFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLCT 183
            :|.:.|.:::|.|       .|.|::|:.::       |::|::.:..|  .:..::.|.....:
  Rat   125 EWKRLRTLLSPTFTSGKLKEMFPIINQYADL-------LVKNVKHEAEK--GNPITMKDIFGAYS 180

  Fly   184 MDTICETAMGVSINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLARAEKKALNVL 248
            ||.|..|:.||::::.:|..:.:||.||.:      ..||.|..|.|:.:|.|......:|.::.
  Rat   181 MDVITGTSFGVNVDSLNNPQNPFVQKVKKL------LKFNFLDPFFLSVILFPFLTPVFEAFDIT 239

  Fly   249 HQFTEKII--VQRREELIREGSSQESSNDDADVGAKRKMAFLDILL--QSTVDE---RPLSNLDI 306
             .|.:.::  .:...|.::|...||.        .|:::.||.:::  ||:.|:   :.|::::|
  Rat   240 -VFPKDVMKFFRTSVERMKENRMQEK--------VKQRLDFLQLMINSQSSGDKESHQGLTDVEI 295

  Fly   307 REEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDL 371
            ..:...|:|.|::||||||.|..|.:||||:.|||..:||.:.:.|  ..||:|::|.::.|:|:
  Rat   296 VAQSIFFIFAGYETTSSALSFALYLLATHPDLQKKLQDEIDAALPN--KAPVTYDVLVEMEYLDM 358

  Fly   372 CVKETLRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVT 436
            .:.||||::|....|.|...:|.||||..||.||.:.:....|.:..:.:.||..|.||||. ..
  Rat   359 VLNETLRLFPVGGRLERVCKKDVEINGVFIPKGTVVMVPTFALHKDPKCWPEPEEFCPERFR-KK 422

  Fly   437 TAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKE 501
            ..:.:|||.|:||..|||||||.:||::.:|..:..||:::......::..|..|..:...:.::
  Rat   423 NQDSINPYIYLPFGNGPRNCIGMRFALMNMKIALVRVLQNFSFGLCKETQIPLKLRKKGFFQPEK 487

  Fly   502 PLMFKVRER 510
            |::.:...|
  Rat   488 PIILRAVSR 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 CYP4 73..504 CDD:410721 126/446 (28%)
Cyp3a62NP_001019403.1 CYP3A 67..492 CDD:410743 129/464 (28%)

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