DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and Cyp3a62

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001019403.1 Gene:Cyp3a62 / 170509 RGDID:1595919 Length:497 Species:Rattus norvegicus


Alignment Length:529 Identity:148/529 - (27%)
Similarity:263/529 - (49%) Gaps:71/529 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ILASALFVGLLLY----HLKFKRLIDLISYMPGPPVLPLVG------HGHHFIGKPPHEMVKKIF 62
            :|.:.:.|.|.||    |..||:|     .:.||..||.||      ||.....:..|:....|:
  Rat    13 MLLATILVLLYLYGTSTHGNFKKL-----GISGPKPLPFVGNILAYRHGFWEFDRHCHKKYGDIW 72

  Fly    63 EFMETYSKDQVLKVWLGPEL--NVLMGNPKDVEVVLGTLRFNDKAGEYKALEPWLKEGLLVSRGR 125
            .|.|  .:..:|.: ..|::  .||:   |:........|....||       .||:.:.:|...
  Rat    73 GFYE--GRQPILAI-TDPDIIKTVLV---KECYSTFTNRRSFGPAG-------ILKKAITLSEDE 124

  Fly   126 KWHKRRKIITPAF-------HFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLCT 183
            :|.:.|.:::|.|       .|.|::|:.::       |::|::.:..|  .:..::.|.....:
  Rat   125 EWKRLRTLLSPTFTSGKLKEMFPIINQYADL-------LVKNVKHEAEK--GNPITMKDIFGAYS 180

  Fly   184 MDTICETAMGVSINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLARAEKKALNVL 248
            ||.|..|:.||::::.:|..:.:||.||.:      ..||.|..|.|:.:|.|......:|.::.
  Rat   181 MDVITGTSFGVNVDSLNNPQNPFVQKVKKL------LKFNFLDPFFLSVILFPFLTPVFEAFDIT 239

  Fly   249 HQFTEKII--VQRREELIREGSSQESSNDDADVGAKRKMAFLDILL--QSTVDE---RPLSNLDI 306
             .|.:.::  .:...|.::|...||.        .|:::.||.:::  ||:.|:   :.|::::|
  Rat   240 -VFPKDVMKFFRTSVERMKENRMQEK--------VKQRLDFLQLMINSQSSGDKESHQGLTDVEI 295

  Fly   307 REEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDL 371
            ..:...|:|.|::||||||.|..|.:||||:.|||..:||.:.:.|  ..||:|::|.::.|:|:
  Rat   296 VAQSIFFIFAGYETTSSALSFALYLLATHPDLQKKLQDEIDAALPN--KAPVTYDVLVEMEYLDM 358

  Fly   372 CVKETLRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVT 436
            .:.||||::|....|.|...:|.||||..||.||.:.:....|.:..:.:.||..|.||||. ..
  Rat   359 VLNETLRLFPVGGRLERVCKKDVEINGVFIPKGTVVMVPTFALHKDPKCWPEPEEFCPERFR-KK 422

  Fly   437 TAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKE 501
            ..:.:|||.|:||..|||||||.:||::.:|..:..||:::......::..|..|..:...:.::
  Rat   423 NQDSINPYIYLPFGNGPRNCIGMRFALMNMKIALVRVLQNFSFGLCKETQIPLKLRKKGFFQPEK 487

  Fly   502 PLMFKVRER 510
            |::.:...|
  Rat   488 PIILRAVSR 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 138/493 (28%)
Cyp3a62NP_001019403.1 p450 39..491 CDD:278495 138/491 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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