DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d1 and CYP26A1

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_000774.2 Gene:CYP26A1 / 1592 HGNCID:2603 Length:497 Species:Homo sapiens


Alignment Length:531 Identity:131/531 - (24%)
Similarity:216/531 - (40%) Gaps:107/531 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AILASAL--FVGLLLYHLKFKRLIDL-----------ISYMPGPPVLPLVG-------------- 44
            |:|||||  ||..||..|...:|.||           :...||....|..|              
Human     5 ALLASALCTFVLPLLLFLAAIKLWDLYCVSGRDRSCALPLPPGTMGFPFFGETLQMVLQRRKFLQ 69

  Fly    45 ---------HGHHFIGKPPHEMVKKIFEFMETYSKDQVLKVWLGPELNVLMGNPKDVEVVLGTLR 100
                     :..|..|:|.          :.....|.|.::.||....|.:..|..|..:||:  
Human    70 MKRRKYGFIYKTHLFGRPT----------VRVMGADNVRRILLGEHRLVSVHWPASVRTILGS-- 122

  Fly   101 FNDKAGEYKALEPWLKEGLLVSRGRKWHK-RRKIITPAFHFKILDQFVEVF--EKGSRDLLRNME 162
                             |.|.:.....|| |:|:|..||..:.|:.:|.|.  |.||     ::|
Human   123 -----------------GCLSNLHDSSHKQRKKVIMRAFSREALECYVPVITEEVGS-----SLE 165

  Fly   163 QDRLKHGDSGFSLYDWINLCTMDTICETAMGVSINAQSNADSEYVQAVKTISMVLHKRMFNILYR 227
            | .|..|:.|..:|..:............:|.......:.|||. |.|:..     :.|...|:.
Human   166 Q-WLSCGERGLLVYPEVKRLMFRIAMRILLGCEPQLAGDGDSEQ-QLVEAF-----EEMTRNLFS 223

  Fly   228 FDLTYMLTPLARAEKKALNVLHQFTEKIIVQRREEL--IREGSSQESSNDDADVGAKRKMAFLDI 290
            ..:....:.|.|. .||.|::|...|:.|   |.::  :|...:.:...|           .|.:
Human   224 LPIDVPFSGLYRG-MKARNLIHARIEQNI---RAKICGLRASEAGQGCKD-----------ALQL 273

  Fly   291 LLQSTVD--ERPLSNLDIREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRS---VV 350
            |::.:.:  || |....:::.....:|.||:||:||.......:..:|...:|..||::|   :.
Human   274 LIEHSWERGER-LDMQALKQSSTELLFGGHETTASAATSLITYLGLYPHVLQKVREELKSKGLLC 337

  Fly   351 GNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLG 415
            .:::...:..|:|.||.|:...:|||||:.|.||...|..|:..|:||..||.|.|:..|.....
Human   338 KSNQDNKLDMEILEQLKYIGCVIKETLRLNPPVPGGFRVALKTFELNGYQIPKGWNVIYSICDTH 402

  Fly   416 RREELFSEPNIFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVD 480
            ...|:|:....|.|:|| ::...|..:.:::|||..|.|:|:|::||.:.:|.....:.||.:..
Human   403 DVAEIFTNKEEFNPDRF-MLPHPEDASRFSFIPFGGGLRSCVGKEFAKILLKIFTVELARHCDWQ 466

  Fly   481 FVGDSSEPPVL 491
            .:   :.||.:
Human   467 LL---NGPPTM 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 117/490 (24%)
CYP26A1NP_000774.2 p450 14..492 CDD:299894 125/522 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.