DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d1 and Cyp4a10

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_034141.3 Gene:Cyp4a10 / 13117 MGIID:88611 Length:509 Species:Mus musculus


Alignment Length:526 Identity:170/526 - (32%)
Similarity:288/526 - (54%) Gaps:54/526 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FLVIGAILASALFVGLLL-------YHLKFKRLIDLISYMPGPPVLPLVGHGHHFIGKPPHEMVK 59
            ||.:.::|      ||||       ::|..:.|:......|.||.       |.|.|   ||..|
Mouse    18 FLQVASVL------GLLLLLVKAVQFYLHRQWLLKAFQQFPSPPF-------HWFFG---HEKFK 66

  Fly    60 KIFEFMETYS----KDQVLKVWL-GPELNVLMGNPKDVEVVLGTLRFNDKA-GEYKALEPWLKEG 118
            ...|..|..|    .......|. |.:..:.:.:|..::|:||  |.:.|| |.|:.|.||:..|
Mouse    67 GDQELQEIVSCIENFPSAFPRWFWGSKAYLTVYDPDYMKVILG--RSDPKANGAYRLLAPWIGYG 129

  Fly   119 LLVSRGRKWHKRRKIITPAFHFKILDQFVEVFEKGSRDLLRNM--EQDRLKHGDSGFSLYDWINL 181
            ||:..|:.|.:.|:::|||||:.||..:|    |...|.:|.|  :.:||...||...::..|:|
Mouse   130 LLLLNGQPWFQHRRMLTPAFHYDILKPYV----KNMADSIRLMLDKWERLADQDSSIEIFQHISL 190

  Fly   182 CTMDTICETAMGVSINAQSNAD-SEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLARAEKKAL 245
            .|:||:.:.|.....:.|.:.: ..|:||:..::.:.|.|:.||.::.|..|.|:...|..|:|.
Mouse   191 MTLDTVMKCAFSHKGSVQVDGNYRTYLQAIGDLNNLFHSRVRNIFHQNDTIYKLSSNGRLAKQAC 255

  Fly   246 NVLHQFTEKIIVQRREELIREGSSQESSNDDADVGAKRKMAFLDILLQSTVDE-RPLSNLDIREE 309
            .:.|..|:.:|..|:::|..||..::       :..||::.||||||.:.::. ..:|:.|:|.|
Mouse   256 QLAHDHTDGVIKLRKDQLQDEGELEK-------IKKKRRLDFLDILLFARMENGDSMSDKDLRAE 313

  Fly   310 VDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVK 374
            ||||||||||||:|.:.:.||.:||||:.|::|.||::|::|:..|  ::::.|:|:.|..:|:|
Mouse   314 VDTFMFEGHDTTASGVSWIFYALATHPDHQQRCREEVQSLLGDGSS--ITWDHLDQIPYTTMCIK 376

  Fly   375 ETLRMYPSVPLLGRKVLEDCEI-NGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTA 438
            |.||:||.||.:.|::...... :|:.:|.|..:.:|...|....:::..|.:|.|.||   ...
Mouse   377 EALRLYPPVPGIVRELSTSVTFPDGRSLPKGVQVTLSIYGLHHNPKVWPNPEVFDPSRF---APD 438

  Fly   439 EKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEPL 503
            ...:.::::|||.|.|||||::|||.|:|.|||..|..:|:  :.|.:..|:.:|.|:|::|..:
Mouse   439 SPRHSHSFLPFSGGARNCIGKQFAMSELKVIVALTLLRFEL--LPDPTRVPMPLARLVLKSKNGI 501

  Fly   504 MFKVRE 509
            ...:::
Mouse   502 YLHLKK 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 161/482 (33%)
Cyp4a10NP_034141.3 p450 52..503 CDD:278495 161/480 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845112
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.740

Return to query results.
Submit another query.