DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and LOC103692784

DIOPT Version :9

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:XP_038935978.1 Gene:LOC103692784 / 103692784 RGDID:9252969 Length:337 Species:Rattus norvegicus


Alignment Length:346 Identity:120/346 - (34%)
Similarity:194/346 - (56%) Gaps:30/346 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 LYDWINLCTMDTICETAMGVSINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLAR 239
            :::.|:|.|:|::.:...|...|.| .:.|||:.|:..:|.:..||.:.:....|..|..|...|
  Rat     1 MFENISLMTLDSLQKCLFGFDSNCQ-ESPSEYISAILELSSLTIKRSYQLFLYLDFLYYRTADGR 64

  Fly   240 AEKKALNVLHQFTEKIIVQRREELIREGSSQ--ESSNDDADVGAKRKMAFLDILLQSTVDE--RP 300
            ..:||.:::|.||:.:|.:||..|..:|..:  ||...    ...:.:.|:|:||.:. ||  :.
  Rat    65 RFRKACDLVHSFTDAVIRERRRLLSSQGVDEFLESKTK----SKSKTLDFIDVLLLAK-DEHGKE 124

  Fly   301 LSNLDIREEVDTFMF--EGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELL 363
            ||:.|||.|.|||||  |.||||:|.|.:..||:|.|||.|:.|.:|:..::.:.:...:.::.|
  Rat   125 LSDEDIRAEADTFMFGDESHDTTASTLSWILYNLARHPEYQESCLQEVWELLRDREPEEIEWDDL 189

  Fly   364 NQLHYVDLCVKETLRMYPSVPLLGRKVLEDCEI-NGKLIPAGTNIGISPLYLGRREELFSEPNIF 427
            .||.::.:|:||:||::|....|.|:..:|..: :|::||.|....||...:.....::.:|.::
  Rat   190 AQLPFLTMCIKESLRLHPPAVDLLRRCTQDIVLPDGRVIPKGNICVISIFGIHHNPSVWPDPEVY 254

  Fly   428 KPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEP---P 489
            .|.||| ..:.:|.:|.::|||||||||||||.|||.|:|..||..|..:.:  :.|..||   |
  Rat   255 DPFRFD-PESRQKRSPLSFIPFSAGPRNCIGQTFAMNEMKVAVALTLLRFRL--LPDDKEPRRKP 316

  Fly   490 VLIAELILRTK-------EPL 503
                |:|||.:       |||
  Rat   317 ----EIILRAEGGLRLLVEPL 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 120/346 (35%)
LOC103692784XP_038935978.1 cytochrome_P450 <1..328 CDD:425388 117/339 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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