DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d1 and cyp26c1

DIOPT Version :10

Sequence 1:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster
Sequence 2:XP_031761583.1 Gene:cyp26c1 / 100489980 XenbaseID:XB-GENE-1219115 Length:608 Species:Xenopus tropicalis


Alignment Length:613 Identity:124/613 - (20%)
Similarity:210/613 - (34%) Gaps:195/613 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFLV-------IGAILASALFVGLL------LYHLKFKRLIDLISYMPGPPVLPLVGHGHHFIGK 52
            |||:       ..|.|.|||.:.||      |:.|::....|..|.:|    ||....|..|.|:
 Frog     1 MFLLEISYTSFFEAALTSALSLVLLLAASHQLWSLRWHSTRDRGSSLP----LPKGSMGWPFFGE 61

  Fly    53 PPHEMVK-------------KIFE-------FMETYSKDQVLKVWLGPELNVLMGNPKDVEVVLG 97
            ..|.:|:             .||:       .:.....:.:.|:.||....|....|:..:::||
 Frog    62 TLHWLVQGSSFHSSRREKYGNIFKTHLLGKPVIRVTGAENIRKILLGEHHLVSTQWPQSTQIILG 126

  Fly    98 TLRFNDKAGEYKALEPWLKEGLLVSRGRKWHKRRKIITPAFHFKILDQFVEVFEKGSRDLLRNME 162
            :...::..||..                  .::||:::.......|:.::....:..|..:|:. 
 Frog   127 SNTLSNSIGELH------------------RQKRKMMSKVLSSAALESYLPRIHEAVRWEVRSW- 172

  Fly   163 QDRLKHGDSGFSLYDWINLCTMDTICETAMGVSINAQSNADSEYVQAVKTISMVLHKRMFNILYR 227
                ..|....|:.......|........:|:|:     .|:::.:..:|...::..     |:.
 Frog   173 ----CRGVGPVSMLSCAKALTFRIAARILLGLSL-----TDTQFQELTRTFEQLVEN-----LFC 223

  Fly   228 FDLTYMLTPLARAEKKALNVLHQFTEKIIVQRREELIREGSSQESSN--DDADVGAKRKMAFLDI 290
            ..|....:.| |...||.:.|||:        .||.|:|..|:...:  :||          ||.
 Frog   224 LPLDIPFSGL-RKGMKARDTLHQY--------MEEAIKEKLSKRDPDACEDA----------LDY 269

  Fly   291 LLQSTVD-ERPLSNLDIREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRS------ 348
            |:.|..: .:.::..:::|.....:|....||:||.......:..||.|..|..:|:.|      
 Frog   270 LINSAKEGGKEINMQELKESAIELIFAAFLTTASASTSLVLLLLKHPSAIHKIRQELASHGLSEH 334

  Fly   349 --------------------------------VVG------------------------------ 351
                                            |:|                              
 Frog   335 CEQCLPATENPNNNILQDNGHQCLTAGCQLPLVMGTEGQVKTLWEQTKQLLTDRTDQDPQNSLSS 399

  Fly   352 ----------------NDKS--TPV-----------------SYELLNQLHYVDLCVKETLRMYP 381
                            :|||  :||                 |.|.|..|||:|..|||.||:.|
 Frog   400 KNLVNGENRIQEAPCSHDKSNCSPVPGKLQNSVFEGTCQQNISLEKLKSLHYLDCVVKEVLRLLP 464

  Fly   382 SVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAEKLNPYAY 446
            .|....|..|:..|::|..||.|.::..|.........::....:|.||||.......||..:.|
 Frog   465 PVSGGYRTALQTFELDGYQIPKGWSVMYSIRDTHETAAVYQNAEMFDPERFSTERDEGKLGRFNY 529

  Fly   447 IPFSAGPRNCIGQKFAMLEIKAIVANVL 474
            |||..|.|:|||::.|.:.:|.:...::
 Frog   530 IPFGGGARSCIGKELAQIILKILAMELV 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d1NP_476907.2 CYP4 73..504 CDD:410721 100/508 (20%)
cyp26c1XP_031761583.1 cytochrome_P450 59..588 CDD:477761 105/551 (19%)

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